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Aerobic bacteria extensively drive the carbon cycle in soil owing to their vigorous respiration; however, their geographical distribution and mechanisms remain poorly understood. The citric acid synthetase-encoding gene (), which encodes the key enzyme in the tricarboxylic acid cycle of aerobic respiration, was used as a marker gene to investigate the geographical distribution of aerobic bacteria in Chinese agricultural fields. The abundance and diversity of -harboring bacteria changed unimodally as the latitude increased, with peak values at middle latitudes, where the dominant species showed the lowest relative abundance. Despite the different water management practices, our data found little difference in the abundance, diversity, or relative abundance of the dominant species of -harboring bacteria between paddy and upland soils on a large scale, which was significantly affected by the soil type (black, fluvo-aquic, and red), which can be defined by the soil texture. Linear regression and random forest model analyses indicated that soil texture strongly regulated the community of -harboring bacteria, particularly the abundance of this functional guild. Generally, less abundant and diverse -harboring bacteria were observed in soils with higher clay content. We identified biomarkers in the different soil types using linear discriminant analysis effect size analysis. The results suggest a significant correlation between soil texture and most of these biomarkers. Additionally, the biomarkers in black soil were mainly -strategists, which include , and , were positively correlated with soil organic carbon content. In contrast, the biomarkers in fluvo-aquic soil were generally -strategists, such as , and were negatively correlated with soil organic carbon content. These different biomarkers likely play distinct roles in soil carbon sequestration. This study provides foundational insights into the role of aerobic bacteria in soil and enhances our understanding of microbial contributions to the biogeochemical cycle of carbon.
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http://dx.doi.org/10.3389/fmicb.2025.1541460 | DOI Listing |
Food Chem X
August 2025
Department of Food Science, College of Agriculture and Veterinary Medicine, United Arab Emirates University, Al-Ain 15551, United Arab Emirates.
Plant-based sausages (PBS) were formulated using heat-induced gelation to assess the influence of gluten in terms of structure, texture profile, rheology, digestibility, and shelf-life of PBS. The PBS formulation contained varying amounts of black chickpea flour, mung bean protein isolate, wheat gluten (WG), and fixed amounts of psyllium husk, water, and oil. WG significantly influenced the color.
View Article and Find Full Text PDFWater Res
August 2025
Guangzhou Landscape Architecture Group Co., Ltd., Guangzhou 510000, PR China; Guangzhou Municipal Construction Group Co., Ltd., Guangzhou 510030, PR China.
Enhanced ammonium (10.6 - 14.7%) and total inorganic nitrogen (TIN, 4.
View Article and Find Full Text PDFMar Pollut Bull
September 2025
Department of Ocean Engineering, Pukyong National University, 45 Yongso-ro, Nam-Gu, Busan 48513, Republic of Korea. Electronic address:
Coastal sediments in semi-enclosed bays are particularly susceptible to contamination due to limited water circulation and ongoing contaminant input. In Masan Bay, a heavily impacted coastal area in Korea, sediment remediation is essential to alleviate the effects of organic enrichment and hypoxia. This study investigated the effectiveness of oyster shell capping as an in-situ remediation technique by assessing its impact on sediment environment, microbial communities, and macrobenthic fauna.
View Article and Find Full Text PDFBiodegradation
September 2025
Biotechnology Development and Applications Group, Aptim Federal Services, LLC, Lawrenceville, NJ, USA.
1,2,3-Trichloropropane (1,2,3-TCP) is a suspected human carcinogen and a persistent emerging contaminant in groundwater and drinking water. 1,2,3-TCP was historically used as a solvent for cleaning and maintenance, paint and varnish removal, and degreasing, but its sources also include chemical manufacturing processes and application of soil fumigants. The California Department of Public Health (CDPH) has established a state maximum contaminant level (MCL) of 0.
View Article and Find Full Text PDFISME J
September 2025
Division of Biology and Biological Engineering, California Institute of Technology Pasadena, California, United States.
At methane seeps worldwide, syntrophic anaerobic methane-oxidizing archaea and sulfate-reducing bacteria promote carbonate precipitation and rock formation, acting as methane and carbon sinks. Although maintenance of anaerobic oxidation of methane (AOM) within seep carbonates has been documented, its reactivation upon methane exposure remains uncertain. Surface-associated microbes may metabolize sulfide from AOM, maintain carbonate anoxia, contribute to carbonate dissolution, and support higher trophic levels; however, these communities are poorly described.
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