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Multiple instance learning(MIL) has shown superior performance in the classification of whole-slide images(WSIs). The implementation of multiple instance learning for WSI classification typically involves two components, i.e., a feature extractor, which is used to extract features from patches, and an MIL aggregator, responsible for generating WSI features from the patch features, also contributing to the final classification of WSIs. MIL aggregators often employs a specific MIL classification module. To ensure interactive optimization of the feature extractor and the MIL aggregator, existing state-of-the-art methods select patches based on attention scores to optimize the feature extractor. However, they predominantly focus on easy-to-classify instances, leading to inadequate capabilities in discriminating hard-toclassify instances. In this paper, we introduces a novel Multiple Instance Learning method, HPA-MIL (Hard Pseudo-label Assignment), which directly mines hard instances through pseudo-label assignment. Our experiments demonstrate that HPA-MIL achieves an AUC of 0.9523 on the TCGA NSCLC dataset, which outperforms all the existing state-of-the-art methods compared.
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http://dx.doi.org/10.1109/EMBC53108.2024.10782609 | DOI Listing |
Cell Rep
September 2025
Department of Neurology, University of California, Los Angeles, David Geffen School of Medicine, Los Angeles, CA 90095, USA; Department of Neurobiology, University of California, Los Angeles, Los Angeles, CA 90095, USA; Eli and Edythe Broad Center for Regenerative Medicine and Stem Cell Research, Un
Neurodevelopmental disorders often impair multiple cognitive domains. For instance, a genetic epilepsy syndrome might cause seizures due to cortical hyperexcitability and present with memory impairments arising from hippocampal dysfunction. This study examines how a single disorder differentially affects distinct brain regions using induced pluripotent stem cell (iPSC)-derived cortical- and hippocampal-ganglionic eminence assembloids to model developmental and epileptic encephalopathy 13, a condition arising from gain-of-function mutations in the SCN8A gene encoding the sodium channel Nav1.
View Article and Find Full Text PDFOne Health
December 2025
U.S. Geological Survey, Eastern Ecological Science Center, Laurel, MD 20708, USA.
With the continued spread of highly pathogenic avian influenza (HPAI), understanding the complex dynamics of virus transfer at the wild - agriculture interface is paramount. Spillover events (i.e.
View Article and Find Full Text PDFFront Immunol
September 2025
Department of Rheumatology, Endocrinology and Nephrology, Faculty of Medicine and Graduate School of Medicine, Hokkaido University, Sapporo, Japan.
Immune cell metabolism is essential for regulating immune responses, including activation, differentiation, and function. Through glycolysis and oxidative phosphorylation (OXPHOS), metabolism supplies energy and key intermediates for cell growth and proliferation. Importantly, some metabolites generated during these processes act as signaling molecules that influence immune activity.
View Article and Find Full Text PDFDigit Discov
August 2025
Institute for Complex Molecular Systems (ICMS), Eindhoven AI Systems Institute (EAISI), Department of Biomedical Engineering, Eindhoven University of Technology Eindhoven The Netherlands
Data augmentation can alleviate the limitations of small molecular datasets for generative deep learning by 'artificially inflating' the number of instances available for training. SMILES enumeration - wherein multiple valid SMILES strings are used to represent the same molecules - has become particularly beneficial to improve the quality of molecule design. Herein, we investigated whether rethinking SMILES augmentation techniques could further enhance the quality of design.
View Article and Find Full Text PDFPediatr Blood Cancer
September 2025
Nuffield Department of Surgical Sciences, Oxford University, Oxford, UK.
Background: Local control strategies in pediatric oncology are guided by disease-specific considerations. Effective communication of the goals of surgical procedure and associated intraoperative events plays a crucial role in shaping subsequent treatment decisions. However, accurately and comprehensively documenting these findings remains challenging, with considerable variability across different tumor types.
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