Charge Modification of Lysine Mitigates Amyloid-β Aggregation.

Chembiochem

Department of Pharmacy, College of Pharmacy, Yonsei University, 85 Songdogwahak-ro, Yeonsu-gu, Incheon, 21983, Republic of Korea.

Published: February 2025


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

Alzheimer's disease (AD) is a progressive neurodegenerative condition characterized by the deposition of amyloid-β (Aβ) peptides, which aggregate into toxic structures such as oligomers, fibrils, and plaques. The presence of these Aβ aggregates in the brain plays a crucial role in the pathophysiology, leading to synaptic dysfunction and cognitive impairment. Understanding how physiological factors affect Aβ aggregation is essential, and therefore, exploring their influence in vitro will likely provide insights into their role in AD pathology. In this study, we investigated the effects of physiological, free amino acids on Aβ aggregation dynamics. We focused on positively charged amino acids, particularly lysine, and employed a chemical modification, methylation, to neutralize its charge. Our analyses revealed that modified lysine significantly reduced Aβ aggregation, indicating that charge distribution of amino acids plays a crucial role in modulating Aβ aggregation behavior. These findings enhance our understanding of the regulatory factors influencing Aβ aggregation and highlight important considerations for future research on Aβ.

Download full-text PDF

Source
http://dx.doi.org/10.1002/cbic.202400906DOI Listing

Publication Analysis

Top Keywords

aβ aggregation
20
amino acids
12
8
plays crucial
8
crucial role
8
aggregation
6
charge modification
4
modification lysine
4
lysine mitigates
4
mitigates amyloid-β
4

Similar Publications

ClpB, a bacterial homologue of heat shock protein 104 (Hsp104), can disentangle aggregated proteins with the help of the DnaK, a bacterial Hsp70, and its co-factors. As a member of the expanded superfamily of ATPases associated with diverse cellular activities (AAA), ClpB forms a hexameric ring structure, with each protomer containing two AAA modules, AAA1 and AAA2. A long coiled-coil middle domain (MD) is present in the C-terminal region of the AAA1 and surrounds the main body of the ring.

View Article and Find Full Text PDF

Structural determinants for protein unfolding and translocation by the Hsp104 protein disaggregase.

Biosci Rep

December 2017

Verna and Marrs McLean Department of Biochemistry and Molecular Biology, Baylor College of Medicine, One Baylor Plaza, Houston, TX 77030, U.S.A.

Article Synopsis
  • *Key to Hsp104's function are specific amino acid loops in its ATP-binding domains that play crucial roles in substrate translocation and interaction.
  • *Research shows that both flanking aliphatic residues and loop-2 are vital for Hsp104's activity; mutations can significantly impair its function in disaggregating proteins.
View Article and Find Full Text PDF

Mutant Analysis Reveals Allosteric Regulation of ClpB Disaggregase.

Front Mol Biosci

February 2017

Center for Molecular Biology of the Heidelberg University, German Cancer Research Center Heidelberg, Germany.

The members of the hexameric AAA+ disaggregase of and , ClpB, and Hsp104, cooperate with the Hsp70 chaperone system in the solubilization of aggregated proteins. Aggregate solubilization relies on a substrate threading activity of ClpB/Hsp104 fueled by ATP hydrolysis in both ATPase rings (AAA-1, AAA-2). ClpB/Hsp104 ATPase activity is controlled by the M-domains, which associate to the AAA-1 ring to downregulate ATP hydrolysis.

View Article and Find Full Text PDF

Analysis of the cooperative ATPase cycle of the AAA+ chaperone ClpB from Thermus thermophilus by using ordered heterohexamers with an alternating subunit arrangement.

J Biol Chem

April 2015

From the Department of Biology, Faculty of Science and Engineering and the Institute for Integrative Neurobiology, Konan University, Okamoto 8-9-1, Kobe 658-8501, Japan

Article Synopsis
  • * The chaperone utilizes ATP binding and hydrolysis to generate mechanical force necessary for disaggregating proteins, although the details of its ATPase cycle remain complex and poorly understood across different species.
  • * Research on ordered structures of ClpB from Thermus thermophilus revealed that ATP binding is random initially, but once enough ATP binds to one ring, it activates the other ring for cooperative ATP hydrolysis, which is essential for the protein disaggregation function of ClpB.
View Article and Find Full Text PDF

ClpB, a member of the expanded superfamily of ATPases associated with diverse cellular activities (AAA+), forms a ring-shaped hexamer and cooperates with the DnaK chaperone system to reactivate aggregated proteins in an ATP-dependent manner. The ClpB protomer consists of an N-terminal domain, an AAA+ module (AAA-1), a middle domain, and a second AAA+ module (AAA-2). Each AAA+ module contains highly conserved WalkerA and WalkerB motifs, and two arginines (AAA-1) or one arginine (AAA-2).

View Article and Find Full Text PDF