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The impact of non-coding RNAs on stem cell biology and differentiation processes is an important and incompletely understood area of research. Using the testes of as a valuable system for investigating these processes, we identified a polycistronic locus from which two non-coding transcripts, and the long non-coding RNA (lncRNA) , are produced, with alternative polyadenylation implicated in regulation of their differential expression levels. We report here that each transcript has a distinct role in Drosophila testes; the increased expression of results in the disruption of the muscle sheath covering the testis, and the absence of leads to the emergence of germ-cell tumors in developing flies. The deficiency of increases Notch signaling activity in somatic cyst cells, upregulates multiple predicted targets of , and drives germline tumorigenesis. This work implicates as a tumor suppressor that modulates Notch signaling strength and suggests alternative polyadenylation as a novel mechanism for regulation of miRNA expression.
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http://dx.doi.org/10.1101/2024.10.10.617551 | DOI Listing |
The spatial organization and dynamics of a genome are central to gene regulation. While a comprehensive understanding of chromatin organization in the human nucleus has been achieved using fixed-cell methods, measuring the dynamics of specific genomic regions over extended periods in individual living cells remains challenging. Here, we present a robust and fully genetically encoded system for fluorescent labeling and long-term tracking of any accessible non-repetitive genomic locus in live human cells using fluorogenic and replenishable nanobody array fusions of the dCas9, and compact polycistronic single guide (sg)RNAs.
View Article and Find Full Text PDFJ Bacteriol
August 2025
Department of Microbiology, Molecular Genetics, and Immunology, University of Kansas Medical Center, Kansas City, Kansas, USA.
Unlabelled: can supplement its endogenous fatty acid synthesis pathway (FASII) with exogenous fatty acids it acquires from the environment through the fatty acid kinase (Fak) complex. Although has been thought to not degrade fatty acids, it does possess a potential locus that contains all the genes necessary for β-oxidation. Using mRNA analysis, we determined that the operon can be found on one polycistronic mRNA.
View Article and Find Full Text PDFPlant Biotechnol (Tokyo)
June 2025
Graduate School of Agriculture, Kyoto University.
Wheat ( L.) consists of three genomes, and notable mutant phenotypes can be observed when all homoeologs are knocked out due to functional redundancy among the homoeologous gene copies. Therefore, high editing efficiency is required to rapidly obtain loss-of-function mutants in wheat.
View Article and Find Full Text PDFFront Cell Dev Biol
January 2025
Life Science College, Luoyang Normal University, Luoyang, Henan, China.
During embryonic development, both corneal epithelial cells (CECs) and keratinocytes (KCs) originate from the surface ectoderm. As a result of this shared origin, corneal epithelial cells may exhibit the same characteristics as the skin epidermis in pathological situations, while keratinocytes are ideal seed cells for tissue-engineered corneas. However, how the identities of keratinocytes and corneal epithelial cells are determined is currently unclear.
View Article and Find Full Text PDFFront Bioeng Biotechnol
October 2024
Energy and Environment Directorate, Pacific Northwest National Laboratory, Richland, WA, United States.
CRISPR technology has revolutionized fungal genetic engineering by accelerating the pace and expanding the feasible scope of experiments in this field. Among various CRISPR-Cas systems, Cas9 and Cas12a are widely used in genetic and metabolic engineering. In filamentous fungi, both Cas9 and Cas12a have been utilized as CRISPR nucleases.
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