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The higher classification of termites requires substantial revision as the Neoisoptera, the most diverse termite lineage, comprise many paraphyletic and polyphyletic higher taxa. Here, we produce an updated termite classification using genomic-scale analyses. We reconstruct phylogenies under diverse substitution models with ultraconserved elements analyzed as concatenated matrices or within the multi-species coalescence framework. Our classification is further supported by analyses controlling for rogue loci and taxa, and topological tests. We show that the Neoisoptera are composed of seven family-level monophyletic lineages, including the Heterotermitidae Froggatt, Psammotermitidae Holmgren, and Termitogetonidae Holmgren, raised from subfamilial rank. The species-rich Termitidae are composed of 18 subfamily-level monophyletic lineages, including the new subfamilies Crepititermitinae, Cylindrotermitinae, Forficulitermitinae, Neocapritermitinae, Protohamitermitinae, and Promirotermitinae; and the revived Amitermitinae Kemner, Microcerotermitinae Holmgren, and Mirocapritermitinae Kemner. Building an updated taxonomic classification on the foundation of unambiguously supported monophyletic lineages makes it highly resilient to potential destabilization caused by the future availability of novel phylogenetic markers and methods. The taxonomic stability is further guaranteed by the modularity of the new termite classification, designed to accommodate as-yet undescribed species with uncertain affinities to the herein delimited monophyletic lineages in the form of new families or subfamilies.
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http://dx.doi.org/10.1038/s41467-024-51028-y | DOI Listing |
Mol Phylogenet Evol
September 2025
Centro Ricerca e Innovazione, Fondazione Edmund Mach, Via Mach 1, 38098 San Michele all'Adige, Italy. Electronic address:
Among the different mechanisms triggering diversification processes, chromosomal rearrangements that generate karyotypic changes are common in plants. Luzula (Juncaceae) is among the few angiosperm genera with holocentric chromosomes, which can undergo chromosome fission (agmatoploidy) or fusion (symploidy), resulting in karyotypes with different chromosome numbers and sizes. In this study, 3RAD genome-wide sequencing data and plastid sequences were used to explore evolutionary trends and patterns of genetic diversification among diploid taxa of Luzula sect.
View Article and Find Full Text PDFMol Phylogenet Evol
September 2025
Department of Botany and Zoology, Faculty of Science, Masaryk University, Kotlářská 2, CZ-61137 Brno, Czechia.
The remarkable phenotypic plasticity of land snail shells often results in convergent evolution, leading to frequent taxonomic misidentifications and non-monophyletic classifications. The taxonomy of the Holarctic micro land snails related to Euconulus fulvus has been particularly challenging to resolve. This study integrates mitochondrial and nuclear DNA phylogenetics, geometric morphometrics, and climate suitability modeling to clarify the phylogenetic and taxonomic status of an East Asian lineage within this group.
View Article and Find Full Text PDFProtist
August 2025
Department of Natural History Sciences, Graduate School of Science, Hokkaido University, Kita-10 Nishi-8, Kita-Ku, Sapporo 0600810, Japan.
Kryptoperidinium belongs to a group of dinophytes hosting a diatom as an endosymbiont and is currently considered to comprise a single, putatively bloom-forming and harmful species only. Molecular phylogenetics indicate the existence of a second distinct lineage and therefore species new to science, which we here formally describe as Kryptoperidinium secundum sp. nov.
View Article and Find Full Text PDFMycologia
September 2025
Department of Botany, Faculty of Science, Charles University, Benátská 2, Prague 128 01, Czech Republic.
As a result of long-term field work in subtropical Texas, USA, three novel genera and three new species are introduced in Pezizomycotina to accommodate new or previously described taxa lacking DNA sequence data. In the Dothideomycetes, , gen. nov.
View Article and Find Full Text PDFNew Phytol
October 2025
Department of Organismic and Evolutionary Biology, Harvard University, 22 Divinity Avenue, Cambridge, MA, 02138, USA.
Genomic tools have advanced our understanding of species and population structure, but distinguishing neutral from adaptive evolution remains challenging due to limited methods for measuring a broad spectrum of phenotypic traits. We used spectroscopic data from preserved leaves to test for adaptive divergence among populations of live oaks (Quercus section Virentes), a monophyletic group of seven species that diversified under sympatric, parapatric, and allopatric speciation. We used 427 individuals to test for isolation-by-distance (IBD) and isolation-by-environment (IBE), as well as the influences of selection and phylogenetic inertia on traits.
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