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Nested subset pattern (nestedness) is an important part of the theoretical framework of island biogeography and community ecology. However, most previous studies often used nestedness metrics or randomization algorithms that are vulnerable to type I error. In this study, we investigated the nestedness of lizard assemblages on 37 islands in the Zhoushan Archipelago, China. We used the line-transect method to survey species occurrence, abundance, and habitat types of lizards on 37 islands during 2 breeding seasons in 2021 and 2022. We applied the nested metric WNODF and the conservative null model to control for type I error and quantify the significance of nestedness. Spearman rank correlations were used to evaluate the role of 4 habitat variables (island area, 2 isolation indices, and habitat diversity) and 4 ecological traits (body size, geographic range size, clutch size, and minimum area requirement) in generating nestedness. The results of WNODF analyses showed that lizard assemblages were significantly nested. The habitat-by-site matrix estimated by the program NODF was also significantly nested, supporting the habitat nestedness hypothesis. The nestedness of lizard assemblages were significantly correlated with island area, habitat diversity, clutch size, and minimum area requirement. Overall, our results suggest that selective extinction and habitat nestedness were the main drivers of lizard nestedness in our system. In contrast, the nestedness of lizard assemblages was not due to passive sampling or selective colonization. To maximize the number of species preserved, our results indicate that we should protect both large islands with diverse habitats and species with large area requirement and clutch size.
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http://dx.doi.org/10.1093/cz/zoac103 | DOI Listing |
Environ Microbiol Rep
August 2025
Research Institute for the Environment and Livelihoods, CDU, Darwin, Australia.
Geckos have high skin bacterial diversity, even though gecko skin has antimicrobial, self-cleaning properties. To gain a better understanding of environment-animal-microbiome interactions in these reptiles, we investigated skin bacteria on seven northern Australian gecko species from five sites and two seasons (n = 234) and found support for our hypotheses of divergent communities between species, sites and seasons. Despite that support, predictor variables had low explanatory power, which increased when focusing within a site or species, explaining up to 40% and 27% of the variation among samples at a site or on a species found in multiple sites, respectively.
View Article and Find Full Text PDFCold Spring Harb Protoc
July 2025
Department of Genetics, University of Georgia, Athens, Georgia 30602, USA
Squamates, the taxon that comprises lizards and snakes, are a diverse assemblage of reptiles represented by more than 11,000 described species. Studies of gene function in squamates, however, have remained very limited, largely due to the lack of established genetic tools and suitable experimental systems. A major challenge for the development of CRISPR-based gene editing in these reptiles is that the isolation of fertilized oocytes or single-celled embryos is impractical for most species, given that fertilization occurs internally, the females of many species can store sperm, and simple methods for detecting ovulation are lacking.
View Article and Find Full Text PDFJ Anat
August 2025
Department of Geology and Geophysics, Indian Institute of Technology Kharagpur, Kharagpur, India.
The Late Triassic Tiki fauna from India represents one of the richest and most diverse vertebrate faunal assemblages, essentially known for archosauromorphs, temnospondyls, fishes, lizards, and trace fossils like coprolites. In this paper, we provide a detailed morphological description of isolated lateral osteoderms from a multitaxic bonebed of the Tiki Formation. The osteoderms bear a spike-like eminence formed by two asymmetric flanges, radial ornamentation, and a thick, indented medial margin suggesting that these pertained to a pseudosuchian archosaur.
View Article and Find Full Text PDFOecologia
March 2025
Durrell Institute of Conservation and Ecology, School of Anthropology and Conservation, University of Kent, Marlowe Building, Canterbury, Kent, CT2 7NR, UK.
Habitat alteration can lead to a few 'winning' species outcompeting many 'losing' species, an effect commonly termed as 'Winner-Loser-Replacements' or WLRs. This can lead to homogenisation of species assemblages at phylogenetic and functional levels. Most previous studies analyse responses of species abundance without considering natural history traits associated with those species.
View Article and Find Full Text PDFPeerJ
May 2025
Kirstenbosch Research Centre, South African National Biodiversity Institute, Cape Town, Newlands, South Africa.
Exploration of the microbiome has been referred to as a final frontier in biological research. This is due to its precedence for generating insights on the holistic functioning of organismal biology by exploring the interactions between hosts and their associated symbiotic organisms. The microbiomes of many vertebrate groups still require exploration to advance current knowledge and fill previous knowledge gaps.
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