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An aerobic methanotroph was isolated from a secondary sedimentation tank of a wastewater treatment plant and designated strain OY6. Cells of OY6 were Gram-stain-negative, pink-pigmented, motile rods and contained an intracytoplasmic membrane structure typical of type I methanotrophs. OY6 could grow at a pH range of 4.5-7.5 (optimum pH 6.5) and at temperatures ranging from 20 °C to 37 °C (optimum 30 °C). The major cellular fatty acids were C, Cω7/Cω6 and Cω5; the predominant respiratory quinone was MQ-8. The genome size was 5.41 Mbp with a DNA G+C content of 51.7 mol%. OY6 represents a member of the family of the class and displayed 95.74-99.64 % 16S rRNA gene sequence similarity to the type strains of species of the genus . Whole-genome comparisons based on average nucleotide identity (ANI) and digital DNA-DNA hybridisation (dDDH) confirmed that OY6 should be classified as representing a novel species. The most closely related type strain was EbB, with 16S rRNA gene sequence similarity, ANI by blast (ANIb), ANI by MUMmer (ANIm) and dDDH values of 99.64, 90.46, 91.92 and 44.5 %, respectively. OY6 possessed genes encoding both the particulate methane monooxygenase enzyme and the soluble methane monooxygenase enzyme. It grew only on methane or methanol as carbon sources. On the basis of phenotypic, genetic and phylogenetic data, strain OY6 represents a novel species within the genus for which the name sp. nov. is proposed, with strain OY6 (=GDMCC 1.4114=KCTC 8159=LMG 33371) as the type strain.
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http://dx.doi.org/10.1099/ijsem.0.006321 | DOI Listing |
Int J Syst Evol Microbiol
April 2024
People's Hospital, Hangzhou 310014, Zhejiang, PR China.
J Agric Food Chem
June 2019
Department of Life Science and Biotechnology , Nanyang Normal University, Nanyang 473000 , P. R. China.
Verticillium wilt, caused by Verticillium dahliae, results in a dramatic loss of cotton yields in China. There is great potential for biocontrol to manage this destructive crop disease. In this study, we obtained the endophytic bacterium Bacillus halotolerans Y6 from Verticillium wilt-resistant cotton Gossypium barbadense Xinhai15; this bacterium possesses strong antagonistic abilities that inhibit V.
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