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Picobirnaviruses are double-stranded RNA viruses known from a wide range of host species and locations but with unknown pathogenicity and host relationships. Here, we examined the diversity of picobirnaviruses from cattle and gorillas within and around Bwindi Impenetrable Forest National Park (BIFNP), Uganda, where wild and domesticated animals and humans live in relatively close contact. We use metagenomic sequencing with bioinformatic analyses to examine genetic diversity. We compared our findings to global Picobirnavirus diversity using clustering-based analyses. Picobirnavirus diversity at Bwindi was high, with 14 near-complete RdRp and 15 capsid protein sequences, and 497 new partial viral sequences recovered from 44 gorilla samples and 664 from 16 cattle samples. Sequences were distributed throughout a phylogenetic tree of globally derived picobirnaviruses. The relationship with Picobirnavirus diversity and host taxonomy follows a similar pattern to the global dataset, generally lacking pattern with either host or geography.
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http://dx.doi.org/10.1016/j.meegid.2023.105456 | DOI Listing |
Sci Rep
August 2025
Institute of Novel and Emerging Infectious Diseases, Friedrich-Loeffler-Institut, Federal Research Institute for Animal Health, Südufer 10, 17493, Greifswald-Insel Riems, Germany.
In April 2017, a rat was observed on an airplane during a flight from Miami (USA) to Berlin (Germany). After landing in Berlin, significant efforts were made to trap the rat and disinfect the airplane. As rats are known reservoir hosts for a variety of zoonotic pathogens, this event necessitated the establishment of a standard workflow for the detection of rodent-borne pathogens.
View Article and Find Full Text PDFmSystems
August 2025
Department of Microbiology, School of Medicine, Jiangsu University, Zhenjiang, Jiangsu, China.
Migratory birds are critical global carriers and vectors of various viruses, potentially driving the mutation and transmission of novel pathogens, especially zoonotic viruses. Despite advancements in sequencing technologies, the viral diversity in wintering Siberian cranes () and wild geese ( spp.) remains poorly understood.
View Article and Find Full Text PDFMicrobiol Spectr
September 2025
National Key Laboratory of Intelligent Tracking and Forecasting for Infectious Diseases, School of Medicine, Shenzhen Campus of Sun Yat-sen University, Sun Yat-sen University, Shenzhen, China.
Mongolian marmot is a reservoir for various zoonotic pathogens, including , , and hantaviruses. However, our understanding of the marmot's pathogen profile remains incomplete. Here, we used an unbiased metatranscriptomic approach to comprehensively characterize the virome and bacterial microbiome of 106 Mongolian marmot sampled from Chen Barag Banner, Inner Mongolian, China.
View Article and Find Full Text PDFVirulence
December 2025
Key Laboratory of Medical Molecular Virology (MOE/NHC/CAMS), Shanghai Institute of Infectious Diseases and Biosecurity, Shanghai Frontiers Science Center of Pathogenic Microbes and Infection, Department of Microbiology and Parasitology, School of Basic Medical Sciences, Shanghai Medical College, Fud
Non-Hodgkin lymphoma (NHL), a heterogeneous lymphoid malignancy, demonstrates molecular diversity linked to genetic and immune factors, with emerging roles for viral infections in pathogenesis. Yet, the blood virome's composition and dynamics in NHL remain poorly characterized. This study characterizes the blood virome in NHL subtypes using viral metagenomic sequencing of serum from 217 patients (B-cell: BCL, T-cell: TCL, NK-cell: NKCL) and 40 healthy controls.
View Article and Find Full Text PDFSci Total Environ
September 2025
Department of Environmental Sciences (DES), College of Agriculture and Environmental Sciences (CAES), University of South Africa (UNISA), Florida Campus, Roodepoort 1709, South Africa. Electronic address:
Gulf ecosystems in freshwater lakes are dynamic interfaces of microbial activity, shaped by complex interactions between natural processes and anthropogenic inputs from surrounding urban catchments. This study investigated viral community composition, functional potential, and virus-host interactions along the Nakivubo catchment-Lake Victoria interface in Murchison Bay, Uganda. Metagenomic profiling of 28 samples across four compartments: wastewater treatment plant (WWTP); a municipal channel; papyrus-dominated wetland; and Lake water, revealed spatially distinct viromes dominated by Uroviricota (45.
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