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, the causal agent of papaya dieback disease, is a devastating pathogen that has caused a tremendous decrease in Malaysian papaya export and affected papaya crops in neighbouring countries. A few studies on bacterial species capable of suppressing have been reported, but the availability of antagonistic fungi remains unknown. In this study, mycelial suspensions from five rhizospheric isolates of Malaysian origin were found to exhibit notable antagonisms against during co-cultivation. We further characterised three isolates, UKM-M-UW RA5, UKM-M-UW RA6, and UKM-M-UW RA3a, that showed significant growth inhibition zones on plate-based inhibition assays. A study of the genomes of the three strains through a combination of Oxford nanopore and Illumina sequencing technologies highlighted potential secondary metabolite pathways that might underpin their antimicrobial properties. Based on these findings, the fungal isolates are proven to be useful as potential biological control agents against and the genomic data opens possibilities to further explore the underlying molecular mechanisms behind their antimicrobial activity, with potential synthetic biology applications.
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http://dx.doi.org/10.3390/jof8030246 | DOI Listing |
Sci Rep
February 2025
Department of Plant Protection, School of Agriculture, Shiraz University, Shiraz, 7144113131, Iran.
Canker and dieback, caused by members of the Botryosphaeriaceae family, pose significant threats to plant productivity, food security, and natural ecosystems, particularly in economically important woody crops including fig trees. Detecting and identifying these pathogens is challenging due to their latent infections and the presence of multiple pathogens within the same host. In our study, we developed a PCR assay using three carefully selected primer pairs based on sequence differences in two protein-coding genes, β-tubulin and RNA polymerase II.
View Article and Find Full Text PDFJ Fungi (Basel)
November 2022
Department of Soil, Plant and Food Sciences, University of Bari A. Moro, 70126 Bari, Italy.
Lasiodiplodia (family Botryosphaeriaceae) is a widely distributed fungal genus that causes a variety of diseases in tropical and subtropical regions. During 2020−2021, a routine survey of fruit tree plants was conducted in five Egyptian Governorates, and fresh samples exhibiting dieback, decline, leaf spot and root rot symptoms were collected. Collection from eight different symptomatic leaves, twigs, branches and roots of fruit trees yielded 18 Lasiodiplodia-like isolates.
View Article and Find Full Text PDFJ Fungi (Basel)
June 2022
Department of Agriculture, Food and Environment (Di3A), University of Catania, 95123 Catania, Italy.
Stem cankers and twig dieback were the most serious disease of fig () and loquat () noticed in a survey of fruit tree orchards in the Fars Province, Iran. Isolates of were consistently recovered from symptomatic fig and loquat trees. Phylogenetic analyses of multiple nuclear loci, internal transcribed spacer regions (ITS) of rDNA, RNA polymerase II subunit 2 (), and translation elongation factor 1-α (), combined with morphological observations, revealed that isolates could be referred to a still unknown taxon, which was formally described as sp.
View Article and Find Full Text PDFJ Fungi (Basel)
February 2022
School of Life Sciences, University of Warwick, Gibbet Hill Road, Coventry CV4 7AL, UK.
Biology (Basel)
October 2020
School of Biosciences and Biotechnology, Faculty of Science and Technology, Universiti Kebangsaan Malaysia, Bangi 43600, Selangor, Malaysia.
The alternative sigma (σ) factor E, RpoE or HrpL, has been reported to be involved in stress- and pathogenicity-related transcription initiation in and many other Gram-negative bacteria, including spp. and spp. A previous study identified the / transcript as one of the significant differentially expressed genes (DEGs) during early infection in papaya and those data serve as the basis of the current project.
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