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Rapid environmental change can lead to population extinction or evolutionary rescue. The global staple crop sorghum () has recently been threatened by a global outbreak of an aggressive new biotype of sugarcane aphid (SCA; ). We characterized genomic signatures of adaptation in a Haitian breeding population that had rapidly adapted to SCA infestation, conducting evolutionary population genomics analyses on 296 Haitian lines versus 767 global accessions. Genome scans and geographic analyses suggest that SCA adaptation has been conferred by a globally rare East African allele of , which spread to breeding programs in Africa, Asia, and the Americas. De novo genome sequencing revealed potential causative variants at . Markers developed from the sweep predicted resistance in eight independent commercial and public breeding programs. These findings demonstrate the value of evolutionary genomics to develop adaptive trait technology and highlight the benefits of global germplasm exchange to facilitate evolutionary rescue.
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http://dx.doi.org/10.1126/sciadv.abj4633 | DOI Listing |
Proc Natl Acad Sci U S A
September 2025
National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bangalore 560065, India.
Evolutionary rescue helps populations survive environmental change, but the phenotypic and demographic factors associated with rescue dynamics and its long-term effects remain unclear. We experimentally evolved 10 wild-collected populations of flour beetles from across India in a suboptimal corn resource for 70 generations (>5 y), collecting >10,000 population census points book-ended by measurements of fitness-related traits for 30 experimental lines. Despite clear ancestral trait differences, all lines showed highly parallel evolutionary rescue within 20 generations.
View Article and Find Full Text PDFScience
August 2025
Conservation Science Wildlife Health, San Diego Zoo Wildlife Alliance, Escondido, CA, USA.
Two-thirds of Earth's species have undergone population declines, leaving many vulnerable to genomic erosion and inbreeding depression. Genetic rescue can boost the fitness of small populations, but perceived risks of outbreeding depression can limit its use. We quantified these trade-offs in hundreds of endangered Pacific pocket mice () by combining whole-genome sequences with fitness data.
View Article and Find Full Text PDFNew Phytol
August 2025
North Carolina State University, Raleigh, NC, 27607, USA.
Herbaceous plant species have been the focus of extensive, long-term research into climate change responses, but there has been little effort to synthesize results and predicted outlooks. This primer summarizes research on climate change responses for eight intensively studied herbaceous plant species. We establish generalities across species, examine limitations, and propose a path forward.
View Article and Find Full Text PDFPhys Rev E
July 2025
Universidade Federal de Pernambuco, Departamento de Física, Centro de Ciências Exatas e da Natureza, Recife-PE 50670-901, Brazil.
This study quantifies the probabilities of evolutionary rescue (ER) in populations facing abrupt environmental changes. We consider a population of asexual haploid individuals that evolves without recombination. The research integrates standing genetic variation and de novo mutations within a framework beyond traditional single-locus models.
View Article and Find Full Text PDFDev Biol
August 2025
Sorbonne Université, CNRS, Biologie Intégrative des Organismes Marins (BIOM), F-66650, France. Electronic address:
Amphioxus, or cephalochordates, have a key phylogenetic position among chordates and serve as pivotal invertebrate models for investigating the evolutionary origins of vertebrate traits. Although functional genetic tools have recently been developed, their application has been limited to the Floridian and Asian species, Branchiostoma floridae and Branchiostoma belcheri, respectively. In this study, we established a CRISPR/Cas9-based genome editing protocol to generate F0 mosaic mutants (crispants) in the European amphioxus B.
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