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A general model of multivalent binding with ligands of heterotypic subunits and multiple surface receptors. | LitMetric

A general model of multivalent binding with ligands of heterotypic subunits and multiple surface receptors.

Math Biosci

Bioinformatics Interdepartmental Program, University of California, Los Angeles, Los Angeles, California, 90095, United States; Department of Bioengineering, University of California, Los Angeles, Los Angeles, California, 90095, United States; Jonsson Comprehensive Cancer Center, University of Calif

Published: December 2021


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Article Abstract

Multivalent cell surface receptor binding is a ubiquitous biological phenomenon with functional and therapeutic significance. Predicting the amount of ligand binding for a cell remains an important question in computational biology as it can provide great insight into cell-to-cell communication and rational drug design toward specific targets. In this study, we extend a mechanistic, two-step multivalent binding model. This model predicts the behavior of a mixture of different multivalent ligand complexes binding to cells expressing various types of receptors. It accounts for the combinatorially large number of interactions between multiple ligands and receptors, optionally allowing a mixture of complexes with different valencies and complexes that contain heterogeneous ligand units. We derive the macroscopic predictions and demonstrate how this model enables large-scale predictions on mixture binding and the binding space of a ligand. This model thus provides an elegant and computationally efficient framework for analyzing multivalent binding.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC8612982PMC
http://dx.doi.org/10.1016/j.mbs.2021.108714DOI Listing

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