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The effect of macromolecular crowding on the stability of proteins can change with temperature. This dependence might reveal a delicate balance between two factors: the entropic excluded volume and the stability-modulating quinary interactions. Here we computationally investigate the thermal stability of the native state of chymotrypsin inhibitor 2 (CI2), which was previously shown by experiments to be destabilized by protein crowders at room temperature. Mimicking experimental conditions, our enhanced-sampling atomistic simulations of CI2 surrounded by lysozyme and bovine serum albumin reproduce this destabilization but also provide evidence of a crossover temperature above which lysozyme is found to become stabilizing, as previously predicted by analysis of thermodynamic data. We relate this crossover to the different CI2-crowder interactions and the local packing experienced by CI2. In fact, we clearly show that the pronounced stabilization induced by lysozyme at high temperatures stems from the tight local packing created around CI2 by this smaller crowder.
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http://dx.doi.org/10.1021/acs.jpclett.0c03626 | DOI Listing |
Proc Natl Acad Sci U S A
September 2025
Life Science Center for Survival Dynamics, Tsukuba Advanced Research Alliance, University of Tsukuba, Tsukuba 305-8577, Japan.
All organisms are exposed to various stressors, which can sometimes lead to organismal death, depending on their intensity. While stress-induced organismal death has been observed in many species, the underlying mechanisms remain unclear. In this study, we investigated the molecular mechanisms of stress-induced organismal death in the fruit fly .
View Article and Find Full Text PDFJ Inorg Biochem
December 2025
Institute of Medicinal and Pharmaceutical Chemistry, Technische Universität Braunschweig, Beethovenstr. 55, 38106 Braunschweig, Germany. Electronic address:
Selected gold(III)-dithiocarbamato complexes were identified as potent inhibitors of two critical enzymes involved in the SARS-CoV-2 replication cycle, the papain-line protease (PL) and the 3-chymotrypsin-like protease (3CL), showing exceptional inhibition of PL with IC values in the range of 0.1-0.2 μM and rather moderate activity against 3CL (IC values 8-9 μM).
View Article and Find Full Text PDFJ Pharm Biomed Anal
December 2025
College of Pharmacy, Shandong University of Traditional Chinese Medicine, Jinan, Shandong 250355, China. Electronic address:
Clinical studies have demonstrated that many traditional Chinese medicines (TCM) exhibit not only antiviral effects but also efficacy in alleviating clinical symptoms of Coronavirus Disease 2019 (COVID-19). However, the pharmacologically active constituents responsible for their anti-COVID-19 efficacy remain unclear. This study aimed to establish a novel strategy for identifying active ingredients from herbs clinically used for COVID-19.
View Article and Find Full Text PDFAm J Physiol Cell Physiol
August 2025
Institute of Cytology, Russian Academy of Sciences, 194064 Tikhoretsky Ave. 4, St. Petersburg, Russia.
Epithelial sodium channels (ENaCs) have been reported to affect cancer cell development, including the processes of proliferation, apoptosis, and cell motility. Previously, we have shown the stimulating effect of extracellular serine protease trypsin on the activity of amiloride-insensitive ENaC-like channels in human leukemia K562 cells, where the expression of all ENaC subunits was found. However, the effect of serine proteases of various specificities on sodium channels and its functional role in the regulation of cancer progression in transformed blood cells remains unclear.
View Article and Find Full Text PDFBiotechnol Rep (Amst)
September 2025
Department of Biotechnology, Faculty of Science and Technology, Thammasat University, Rangsit Center, Pathum Thani 12121, Thailand.
Seaweed is a promising source of bioactive compounds with potential applications in skincare, particularly for addressing hyperpigmentation. This study investigated the chemical profiles and biological activities of hydrophilic and lipophilic extracts from , and . LC-MS and GC-MS analyses identified 8 and 112 compounds in hydrophilic and lipophilic extracts, respectively.
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