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Enormous amounts of essential intracellular events are crowdedly packed inside picoliter-sized cellular space. However, the significance of the physical properties of cells remains underappreciated because of a lack of evidence of how they affect cellular functionalities. Here, we show that volumetric compression regulates the growth of intestinal organoids by modifying intracellular crowding and elevating Wnt/β-catenin signaling. Intracellular crowding varies upon stimulation by different types of extracellular physical/mechanical cues and leads to significant enhancement of Wnt/β-catenin signaling by stabilizing the LRP6 signalosome. By enhancing intracellular crowding using osmotic and mechanical compression, we show that expansion of intestinal organoids was facilitated through elevated Wnt/β-catenin signaling and greater intestinal stem cell (ISC) self-renewal. Our results provide an entry point for understanding how intracellular crowdedness functions as a physical regulator linking extracellular physical cues with intracellular signaling and potentially facilitate the design of engineering approaches for expansion of stem cells and organoids.
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http://dx.doi.org/10.1016/j.stem.2020.09.012 | DOI Listing |
Eur Phys J E Soft Matter
September 2025
LAAS-CNRS, CNRS, University of Toulouse, Toulouse, France.
Tumor development is accompanied by strong physico-chemical modifications. Among them, compressive stress can emerge in both the epithelial and stromal compartments. Using a simple two-dimensional compression assay which consisted in placing an agarose weight on top of adherent cells, we studied the impact of compressive stress on cell proliferation and motility in different pancreatic cancer cell lines.
View Article and Find Full Text PDFNat Commun
September 2025
Department of Chemistry and Biochemistry, University of Arkansas, Fayetteville, AR, USA.
Rigorous studies have characterized the aa-tRNA selection mechanism in bacteria, which is essential for maintaining translational fidelity. Recent investigations have identified critical distinctions in humans, such as the requirement of subunit rolling and a tenfold slower proofreading step. Although these studies captured key intermediates involved in tRNA selection, they did not elucidate the transitions of aa-tRNA between intermediates.
View Article and Find Full Text PDFCell Rep
September 2025
Institute of Biochemistry, Department of Biology, ETH Zurich, CH-8093 Zürich, Switzerland. Electronic address:
The organization and biophysical properties of the cytoplasm influence all cellular reactions, including molecular interactions and the mobility of biomolecules. The cytoplasm does not behave like a simple fluid but is a densely crowded and highly organized environment. However, its detailed properties, the molecular mechanisms that control them, and how they influence the cellular biochemistry remain poorly understood.
View Article and Find Full Text PDFFASEB J
September 2025
Department of Cell Biophysics, Faculty of Biochemistry, Biophysics and Biotechnology, Jagiellonian University, Kraków, Poland.
The density of mammalian cells is determined primarily by the protein content. Local concentration of proteins in a cell is tightly controlled and varies between the cytoplasm, nucleoplasm, and nucleoli. We demonstrate that repair foci that are formed in response to DNA breaks are much more densely packed with proteins than the surrounding nucleoplasm.
View Article and Find Full Text PDFBiosci Rep
September 2025
Discovery Protein Science, Department of Large Molecule Discovery and Research Data Science, Amgen Inc., South San Francisco, CA, 94080, U.S.A.
Intracellular protein crystallization represents an intriguing form of biomolecular assembly. While the list of intracellularly crystallizing proteins is growing and their physiological roles are being elucidated, the underlying requirements and processes for intracellular crystallogenesis remain largely unknown. To reveal cellular capacity and morphological plasticity to accommodate protein crystals and crystal-like inclusion bodies, this study examines how simultaneously co-expressed phase-separating proteins influence each other's behavior in the endoplasmic reticulum (ER) lumen.
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