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Photosynthetic endolithic communities are common in shallow marine carbonates, contributing significantly to their bioerosion. Cyanobacteria are well known from these settings, where a few are euendoliths, actively boring into the virgin substrate. Recently, anoxygenic phototrophs were reported as significant inhabitants of endolithic communities, but it is unknown if they are euendoliths or simply colonize available pore spaces secondarily. To answer this and to establish the dynamics of colonization, nonporous travertine tiles were anchored onto intertidal beach rock in Isla de Mona, Puerto Rico, and developing endolithic communities were examined with time, both molecularly and with photopigment biomarkers. By 9 months, while cyanobacterial biomass and diversity reached levels indistinguishable from those of nearby climax communities, anoxygenic phototrophs remained marginal, suggesting that they are secondary colonizers. Early in the colonization, a novel group of cyanobacteria (unknown boring cluster, UBC) without cultivated representatives, emerged as the most common euendolith, but by 6 months, canonical euendoliths such as () sp., sp., and Pleurocapsalean clades displaced UBC in dominance. Later, the proportion of euendolithic cyanobacterial biomass decreased, as nonboring endoliths outcompeted pioneers within the already excavated substrate. Our findings demonstrate that endolithic cyanobacterial succession within hard carbonates is complex but can attain maturity within a year's time.
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http://dx.doi.org/10.3390/microorganisms8020214 | DOI Listing |
ISME J
September 2025
Division of Biology and Biological Engineering, California Institute of Technology Pasadena, California, United States.
At methane seeps worldwide, syntrophic anaerobic methane-oxidizing archaea and sulfate-reducing bacteria promote carbonate precipitation and rock formation, acting as methane and carbon sinks. Although maintenance of anaerobic oxidation of methane (AOM) within seep carbonates has been documented, its reactivation upon methane exposure remains uncertain. Surface-associated microbes may metabolize sulfide from AOM, maintain carbonate anoxia, contribute to carbonate dissolution, and support higher trophic levels; however, these communities are poorly described.
View Article and Find Full Text PDFLife (Basel)
June 2025
Department of Ecological and Biological Sciences, University of Tuscia, 01100 Viterbo, Italy.
The Antarctic continent hosts highly specialized microbial ecosystems, particularly within endolithic habitats, where microorganisms colonize the interior of rocks in order to withstand conditions that otherwise cannot support life. Previous studies have characterized the composition and abundance of these communities, as well as their different degrees of stress power; furthermore, the effect of different lithic substrates in shaping their associated bacterial assemblages has been extensively investigated. By contrast, how rock typology exerts fungal endolithic colonization still remains unexplored.
View Article and Find Full Text PDFSci Rep
July 2025
Laboratorio de Biología Molecular Marina-BIOMMAR, Departamento de Ciencias Biológicas, Facultad de Ciencias, Universidad de los Andes, Bogotá, D.C., Colombia.
Coral skeletons provide habitat for a euendolithic community, forming a pigmented band within the skeleton, where Ostreobium is often a dominant group. Euendoliths actively penetrate live coral skeletons, but how they use and modify skeletal structure is not properly understood. This study explores the microstructural characteristics of skeletal microenvironments through a micro-CT technique that analyzes the "footprint" of the euendolithic community on the porosity of coral skeleton.
View Article and Find Full Text PDFMicrobiol Resour Announc
August 2025
Research and Innovation Centre, Fondazione Edmund Mach, San Michele all'Adige, Italy.
A draft genome sequence was assembled and annotated for an uncultured archaeon reconstructed from shotgun metagenomes obtained from Antarctic endoliths. The assembled genome is 1.99 megabases and encodes 2,405 predicted protein-coding genes.
View Article and Find Full Text PDFZoological Lett
December 2024
Dept. Evolutionary Biology, University of Vienna, Djerassiplatz 1, Vienna, 1030, Austria.
Boring bryozoans dissolve calcium carbonate substrates, leaving unique borehole traces. Depending on the shell type, borehole apertures and colony morphology can be diagnostic for distinguishing taxa, but to discriminate among species their combination with zooidal morphology is essential. All boring (endolithic) bryozoans are ctenostomes that, along with other boring taxa, are common in benthic communities.
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