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Research projects in the field of eco-epidemiology of tick-borne diseases often require extensive sampling of arthropod vectors in the field. The aim of our study was to use geographical information systems (GIS) to select appropriate sampling sites of Ixodes ricinus ticks in central European habitat for further ecological studies of vector-borne pathogens (tick-borne encephalitis virus and Borrelia burgdorferi sensu lato). The model area was the Czech-German borderland (the region of South Bohemia and two regions in Germany: the Upper Palatinate and Lower Bavaria) where numerous human tick-borne encephalitis cases are reported annually. We prepared the sampling site design as a multi-criteria evaluation (MCE) task. In the GIS environment, we conducted MCE with a set of environmental, socio-economic and epidemiological data (altitude, vegetation cover, number of tick-borne encephalitis cases recorded in the past, tourist activity). The MCE classified the surveyed area into two classes: suitable for tick collection and unsuitable for tick collection. Subsequently, 50 tick sampling sites were randomly selected in the suitable area: 30 in South Bohemia (Czech Republic) and 20 in the Upper Palatinate and Lower Bavaria regions (Bavaria, Germany). The sampling sites were identified and surveyed in the field. The presence of ticks was confirmed by flagging at each of the selected plots. The described MCE system represents a versatile tool for semi-randomized design of tick sampling sites for research projects in the field of tick-borne pathogen ecology as well as for tick-borne pathogen surveillance programs run by local health authorities.
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http://dx.doi.org/10.1016/j.ttbdis.2019.04.014 | DOI Listing |
Anal Bioanal Chem
September 2025
School of Artificial Intelligence, Hangzhou Dianzi University, Hangzhou, 310018, China.
The prompt and accurate identification of pathogenic bacteria is crucial for mitigating the transmission of infections. Conventional detection methods face limitations, including lengthy processing, complex sample pretreatment, high instrumentation costs, and insufficient sensitivity for rapid on-site screening. To address these challenges, an aptamer (Apt)-sensor based on functionalized magnetic nanoparticles (MNPs) was developed for detecting Escherichia coli.
View Article and Find Full Text PDFGenome Res
September 2025
College of Life Science, Sichuan Agricultural University, Ya'an, 625014, People's Republic of China;
Poultry egg production is shaped by the intertwined action of multiple physiological systems, greatly magnifying the complexity of its underlying genetic regulation. Although multitissue mapping of regulatory variants offers a powerful route to untangle this complexity, comprehensive data sets in ducks remain scarce. Meanwhile, the contributions of peripheral systems beyond neuroendocrine regulation on poultry egg production are still largely unexplored.
View Article and Find Full Text PDFBMJ Open
September 2025
Department of Neurology, Shandong Provincial Hospital Affiliated to Shandong First Medical University, Jinan, Shandong, China
Introduction: Intracranial atherosclerosis is the main cause of stroke globally, with acute large vessel occlusive (LVO) stroke being a predominant contributor to stroke-related mortality. In recent years, aspiration thrombectomy (AT) has emerged as a novel therapeutic method for treating acute LVO stroke. The purpose of this study aims to investigate the safety and efficacy of AT alone or combined with stent retriever thrombectomy (SRT) in the treatment of acute LVO stroke METHODS AND ANALYSIS: This is a multicentre and observational real-world study involving patients diagnosed with acute LVO stroke.
View Article and Find Full Text PDFActa Trop
September 2025
Southville International School and Colleges, Las Pinas City, 1745, Philippines; College of Medical Technology, South SEED LPDH College, Las Pinas, 1745, Philippines; The Graduate School, Centro Escolar University, Manila, 1008, Philippines. Electronic address:
Volcanic eruptions are natural disasters that can change life and the ecosystem. Through molecular testing, this study identified the free-living amoebae (FLA) population in a caldera lake following a phreatomagmatic eruption in 2020 and compared it with pre-established data in 2016 in the same lake. Four sampling sites were identified using purposively sampling, namely: Laurel (T1), Agoncillo (T2), San Nicolas (T3), and Talisay (T4).
View Article and Find Full Text PDFCell Rep Methods
September 2025
Department of Infectious Diseases and Public Health, Jockey Club College of Veterinary Medicine and Life Sciences, City University of Hong Kong, Hong Kong, China; Shenzhen Research Institute, City University of Hong Kong, Shenzhen, Guangdong 518057, China; Tung Biomedical Sciences Centre, City Unive
RNA modifications play crucial roles in prokaryotic cellular processes. In this study, we found that the recent advances in direct RNA sequencing have improved yield, accuracy, and signal-to-noise ratio in bacterial samples. By evaluating four current RNA modification calling models in Escherichia coli transcriptome using native and in vitro transcribed (IVT) RNA, we found the models identified most known rRNA modifications but produced false positives.
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