Bayesian Model Selection Maps for Group Studies Using M/EEG Data.

Front Neurosci

Computational Cognitive Neuroscience Laboratory, Queensland Brain Institute, The University of Queensland, Brisbane, QLD, Australia.

Published: September 2018


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

Predictive coding postulates that we make (top-down) predictions about the world and that we continuously compare incoming (bottom-up) sensory information with these predictions, in order to update our models and perception so as to better reflect reality. That is, our so-called "Bayesian brains" continuously create and update generative models of the world, inferring (hidden) causes from (sensory) consequences. Neuroimaging datasets enable the detailed investigation of such modeling and updating processes, and these datasets can themselves be analyzed with Bayesian approaches. These offer methodological advantages over classical statistics. Specifically, any number of models can be compared, the models need not be nested, and the "null model" can be accepted (rather than only failing to be rejected as in frequentist inference). This methodological paper explains how to construct posterior probability maps (PPMs) for Bayesian Model Selection (BMS) at the group level using electroencephalography (EEG) or magnetoencephalography (MEG) data. The method has only recently been used for EEG data, after originally being developed and applied in the context of functional magnetic resonance imaging (fMRI) analysis. Here, we describe how this method can be adapted for EEG using the Statistical Parametric Mapping (SPM) software package for MATLAB. The method enables the comparison of an arbitrary number of hypotheses (or explanations for observed responses), at each and every voxel in the brain (source level) and/or in the scalp-time volume (scalp level), both within participants and at the group level. The method is illustrated here using mismatch negativity (MMN) data from a group of participants performing an audio-spatial oddball attention task. All data and code are provided in keeping with the Open Science movement. In doing so, we hope to enable others in the field of M/EEG to implement our methods so as to address their own questions of interest.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC6190865PMC
http://dx.doi.org/10.3389/fnins.2018.00598DOI Listing

Publication Analysis

Top Keywords

bayesian model
8
model selection
8
group level
8
data
5
selection maps
4
group
4
maps group
4
group studies
4
studies m/eeg
4
m/eeg data
4

Similar Publications

Background: Assessing skills in simulated settings is resource-intensive and lacks validated metrics. Advances in AI offer the potential for automated competence assessment, addressing these limitations. This study aimed to develop and validate a machine learning AI model for automated evaluation during simulation-based thyroid ultrasound (US) training.

View Article and Find Full Text PDF

While Dynamic Flux Balance Analysis provides a powerful framework for simulating metabolic behavior, incorporating operating conditions such as pH and temperature, which profoundly impact monoclonal antibodies production, remains challenging. This study presents an advanced dFBA model that integrates kinetic constraints formulated as functions of pH and temperature to predict CHO cell metabolism under varying operational conditions. The model was validated against data from 20 fed-batch experiments conducted in Ambr®250 bioreactors.

View Article and Find Full Text PDF

Longitudinal trends in HIV/AIDS adults aged over 60 years: A multidimensional decomposition with global and regional comparisons, 1990-2021.

J Infect Public Health

September 2025

Department of Laboratory Medicine, Obstetrics & Gynecology Hospital of Fudan University, Shanghai Key Lab of Reproduction and Development, Shanghai Key Lab of Female Reproductive Endocrine Related Diseases, Shanghai 200011, China. Electronic address:

Background: Antiretroviral therapy has extended the lifespan of HIV/ADIS. However, research and policies mainly target younger groups, leaving gaps in the care for aging people living with HIV (PLHIV).

Methods: Using data from the 2021 Global Burden of Disease Study, this research evaluated the global, regional, and national burdens of HIV/AIDS in adults aged 60 and above from 1990 to 2021.

View Article and Find Full Text PDF

Protocol for using treeLFA to infer multimorbidity patterns in the form of disease topics from diagnosis data in biobanks.

STAR Protoc

September 2025

Department of Epidemiology, University Medical Center Groningen, University of Groningen, Groningen 9700 RB, the Netherlands. Electronic address:

Research on multimorbidity patterns promotes our understanding of the common pathological mechanisms that underlie co-occurring diseases. Here, we present a protocol to infer multimorbidity clusters in the form of disease topics from large-scale diagnosis data using treeLFA, a topic model based on the Bayesian binary non-negative matrix factorization. We describe steps for installing software, preparing input data, and training the model.

View Article and Find Full Text PDF

Modeling within-level latent interaction effects in multilevel vector-autoregressive models.

Behav Res Methods

September 2025

Wilhelm-Wundt Institute for Psychology, Leipzig University, Neumarkt 9-19, 04109, Leipzig, Germany.

The study of time-dependent within-person dynamics has gained popularity in recent years through the use of multilevel (latent) time-series models. However, due to the complexity of the models, model applications are usually limited with respect to the inclusion of time-varying moderating factors on the longitudinal within-person relations between variables. That is, in common applications of multilevel time-series models, the within-person dynamics of constructs over time are regarded as being insensitive to changes in other time-varying factors or changes in contexts.

View Article and Find Full Text PDF