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The yeast SWR1 complex exchanges histone H2A in nucleosomes with Htz1 (H2A.Z in humans). The cryo-electron microscopy structure of the SWR1 complex bound to a nucleosome at 3.6-angstrom resolution reveals details of the intricate interactions between components of the SWR1 complex and its nucleosome substrate. Interactions between the Swr1 motor domains and the DNA wrap at superhelical location 2 distort the DNA, causing a bulge with concomitant translocation of the DNA by one base pair, coupled to conformational changes of the histone core. Furthermore, partial unwrapping of the DNA from the histone core takes place upon binding of nucleosomes to SWR1 complex. The unwrapping, as monitored by single-molecule data, is stabilized and has its dynamics altered by adenosine triphosphate binding but does not require hydrolysis.
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http://dx.doi.org/10.1126/science.aat7716 | DOI Listing |
Mol Plant
September 2025
State Key Laboratory of Biocontrol, Guangdong Provincial Key Laboratory of Plant Stress Biology, School of Life Sciences, Sun Yat-Sen University, Guangzhou 510275, China. Electronic address:
Chromatin remodeling complexes serve as crucial regulators of chromatin structure in eukaryotes, governing the transcription, DNA repair, and genome stability. Compared with chromatin remodelers in yeast and animals, plant chromatin remodelers exhibit both conserved and lineage-specific features, which facilitate unique adaptive responses. Cutting-edge approaches in biochemistry, epigenomics, and proteomics are revealing unprecedented insights into plant chromatin remodeling mechanisms, and genetic studies continue to demonstrate their essential roles in maintaining chromatin state homeostasis during plant growth and stress adaptation.
View Article and Find Full Text PDFEpigenetics Chromatin
August 2025
Department of Chemistry and Biology, Toronto Metropolitan University, Toronto, Canada.
Background: INO80 and SWR1 are evolutionarily related ATP-dependent chromatin remodeling complexes that regulate the chromatin occupancy of the histone variant H2A.Z, playing critical roles in transcriptional regulation, genome replication, and DNA repair. While the H2A.
View Article and Find Full Text PDFCurr Protoc
July 2025
Institute of Health Sciences and Technology (IHST), Institutes of Physical Sciences and Information Technology, School of Life Sciences and Medical Engineering, Anhui University, Hefei, China.
In eukaryotic cells, nucleosomes are octameric structures composed of DNA and histones, and their tandem arrangement ultimately forms chromosomes. Nucleosome assembly is governed in vivo by a series of molecular mechanisms, particularly histone chaperones such as Swr1, which is indispensable for H2A.Z-nucleosome formation.
View Article and Find Full Text PDFGenome Biol
May 2025
State Key Laboratory for Crop Stress Resistance and High-Efficiency Production, College of Life Sciences and Institute of Future Agriculture, Northwest A&F University, Yangling, 712100, Shaanxi, China.
Background: The H2A.Z histone variant is highly enriched over gene bodies, playing an essential role in several genome-templated processes, including transcriptional regulation and epigenetic patterning across eukaryotes. Deposition of H2A.
View Article and Find Full Text PDFPLoS Biol
May 2025
Department of Biochemistry and Cell Biology, Stony Brook University, Stony Brook, New York, United States of America.
The variant histone H2A.Z is deposited into nucleosomes immediately downstream of promoters, where it plays a critical role in transcription. The site-specific deposition of H2A.
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