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Existing subspace clustering methods typically employ shallow models to estimate underlying subspaces of unlabeled data points and cluster them into corresponding groups. However, due to the limited representative capacity of the employed shallow models, those methods may fail in handling realistic data without the linear subspace structure. To address this issue, we propose a novel subspace clustering approach by introducing a new deep model-Structured AutoEncoder (StructAE). The StructAE learns a set of explicit transformations to progressively map input data points into nonlinear latent spaces while preserving the local and global subspace structure. In particular, to preserve local structure, the StructAE learns representations for each data point by minimizing reconstruction error w.r.t. itself. To preserve global structure, the StructAE incorporates a prior structured information by encouraging the learned representation to preserve specified reconstruction patterns over the entire data set. To the best of our knowledge, StructAE is one of first deep subspace clustering approaches. Extensive experiments show that the proposed StructAE significantly outperforms 15 state-of-the-art subspace clustering approaches in terms of five evaluation metrics.
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http://dx.doi.org/10.1109/TIP.2018.2848470 | DOI Listing |
Chaos
September 2025
Department of Mathematics and Statistics, University of Vermont, Burlington, Vermont 05405, USA.
Almost equitable partitions (AEPs) have been linked to cluster synchronization in oscillatory systems, highlighting the importance of structure in collective network dynamics. We provide a general spectral framework that formalizes this connection, showing how eigenvectors associated with AEPs span a subspace of the Laplacian spectrum that governs partition-induced synchronization behavior. This offers a principled reduction of network dynamics, allowing clustered states to be understood in terms of quotient graph projections.
View Article and Find Full Text PDFInterdiscip Sci
September 2025
School of Mathematics and Physics, Wuhan Institute of Technology, Wuhan, 430205, China.
Single-cell RNA sequencing (scRNA-seq) offers significant opportunities to reveal cellular heterogeneity and diversity. Accurate cell type identification is critical for downstream analyses and understanding the mechanisms of heterogeneity. However, challenges arise from the high dimensionality, sparsity, and noise of scRNA-seq data.
View Article and Find Full Text PDFNeural Netw
August 2025
School of Computer Science and Engineering, Sun Yat-sen University, China. Electronic address:
The bipartite graph structure has shown its promising ability in facilitating the subspace clustering and spectral clustering algorithms for large-scale datasets. To avoid the post-processing via k-means during the bipartite graph partitioning, the constrained Laplacian rank (CLR) is often utilized for constraining the number of connected components (i.e.
View Article and Find Full Text PDFJ Comput Graph Stat
July 2025
Department of Statistics, University of Washington.
The set of local modes and density ridge lines are important summary characteristics of the data-generating distribution. In this work, we focus on estimating local modes and density ridges from point cloud data in a product space combining two or more Euclidean and/or directional metric spaces. Specifically, our approach extends the (subspace constrained) mean shift algorithm to such product spaces, addressing potential challenges in the generalization process.
View Article and Find Full Text PDFIEEE Trans Comput Biol Bioinform
June 2025
The identification of cell types by clustering singlecell RNA sequencing (scRNA-seq) data is a fundamental step in the downstream analysis of single-cell data. However, great challenges remain owing to the inherent characteristics of scRNAseq data, including high dimensionality, high noise, and high sparsity. In this study, we propose a proximity enhanced graph convolutional sparse subspace clustering method scPEGSSC for scRNA-seq data.
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