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Unlabelled: C4 photosynthesis is considered one of the most remarkable examples of evolutionary convergence in eukaryotes. However, it is unknown whether the evolution of C4 photosynthesis required the evolution of new genes. Genome-wide gene-tree species-tree reconciliation of seven monocot species that span two origins of C4 photosynthesis revealed that there was significant parallelism in the duplication and retention of genes coincident with the evolution of C4 photosynthesis in these lineages. Specifically, 21 orthologous genes were duplicated and retained independently in parallel at both C4 origins. Analysis of this gene cohort revealed that the set of parallel duplicated and retained genes is enriched for genes that are preferentially expressed in bundle sheath cells, the cell type in which photosynthesis was activated during C4 evolution. Furthermore, functional analysis of the cohort of parallel duplicated genes identified SWEET-13 as a potential key transporter in the evolution of C4 photosynthesis in grasses, and provides new insight into the mechanism of phloem loading in these C4 species.
Key Words: C4 photosynthesis, gene duplication, gene families, parallel evolution.
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http://www.ncbi.nlm.nih.gov/pmc/articles/PMC4915358 | PMC |
http://dx.doi.org/10.1093/molbev/msw057 | DOI Listing |
Int J Syst Evol Microbiol
September 2025
State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
The family , encompassing the genus and related taxa, comprises diverse Gram-negative, aerobic, rod-shaped bacteria found in varied habitats, including air, soil, water and glaciers. Recent genomic-based taxonomic revisions have reclassified some species into new genera, such as and , due to polyphyletic relationships within the family . Certain species are known for forming biofilms or functioning as aerobic anoxygenic phototrophic bacteria, traits that enhance resilience in extreme environments like the cryosphere.
View Article and Find Full Text PDFISME J
September 2025
Institute of Molecular Biology, Academia Sinica, Taipei, 11529, Taiwan.
Mutualistic endosymbiosis is a cornerstone of evolutionary innovation, enabling organisms to exploit diverse niches unavailable to individual species. However, our knowledge about the early evolutionary stage of this relationship remains limited. The association between the ciliate Tetrahymena utriculariae and its algal endosymbiont Micractinium tetrahymenae indicates an incipient stage of photoendosymbiosis.
View Article and Find Full Text PDFPLoS One
September 2025
Museum of Natural History and Department of Ecology and Evolutionary Biology, University of Colorado, Boulder, Colorado, United States of America.
Diatoms are pivotal in global oxygen, carbon dioxide, and silica cycling, contributing significantly to photosynthesis and serving as fundamental components in aquatic ecosystems. Recent advancements in genomic sequencing have shed light on their evolutionary dynamics, revealing evolutionary complex genomes influenced by symbiotic relationships and horizontal gene transfer events. By analyzing publicly available sequences for 120 plastomes and 70 mitogenomes, this paper aims to elucidate the evolutionary dynamics of diatoms across diverse lineages.
View Article and Find Full Text PDFAnn Bot
September 2025
Department of Ecology, Environment and Plant Sciences, Stockholm University, SE-106 91 Stockholm, Sweden.
Background: Advances in DNA sequencing technology have led to a rapid increase in the number of species with organelle genomes and even complete nuclear genomes being sequenced. Thousands of plastid genomes from across all major clades of land plants are now available, and one of the surprising findings is the recurring event of complete or functional loss of genes involved in cyclic electron transport during photosynthesis - the ndh genes that encode subunits of the chloroplast NADH dehydrogenase-like (NDH) complex. Gene loss in non-photosynthetic, heterotrophic plants may be expected, but the increasing number of losses being discovered in autotrophic plants questions the role and potential dispensability of the ndh genes and the entire NDH complex.
View Article and Find Full Text PDFBiosens Bioelectron
August 2025
Faculty of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, 3200003, Haifa, Israel; The Resnick Sustainable Center for Catalysis, Technion - Israel Institute of Technology, 3200003, Haifa, Israel; Nancy and Stephen Grand Technion Energy Program, Technion - Israel Instit
Exploiting biomass as a fuel source has attracted increasing attention over the last few decades. Combined biotic-abiotic systems can enhance conversion efficiency, but biotic reactions often require oxygen-free conditions, which are hindered by oxygen evolution at the photoanode. Herein, we develop a modular microbial-photoelectrochemical cell (MPEC) that facilitates the one-pot degradation and light-induced conversion of cellulosic material into electrical power and added-value compounds.
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