Publications by authors named "Tomas Hasing"

The advances in genomics and bioinformatics have made possible the study in non-model plants of phenotypes associated to flower development. Floriculture crops are an interesting source of traits associated to flower development such as the transition between zygomorphic and actinomorphic flowers or the production of flowers with double and triple corollas. In this chapter, we summarize the material and methods for the use of floriculture crops to study flower development using genomic tools, from the sequencing and assembly of a reference genome to QTL and RNA-Seq analysis to search candidate genes associated to specific traits.

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  • - This study investigates the evolutionary relationships among a group of allopolyploid tobacco species from Australia, focusing on their hybrid origins from diploid relatives using genetic analysis.
  • - Researchers conducted a detailed analysis of plastid genomes and nuclear gene families, finding that the section is a monophyletic group and identifying the maternal ancestor in the hybridization process.
  • - The findings suggest that the section originated from hybridization between two ancestral species, contributing to a better understanding of polyploid species evolution through comprehensive genomic data.
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Genomics-based diversity analysis of natural vanilla populations is important in order to guide conservation efforts and genetic improvement through plant breeding. Vanilla is a cultivated, undomesticated spice that originated in Mesoamerica prior to spreading globally through vegetative cuttings. Vanilla extract from the commercial species, mainly V.

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Breeding crops for improved flavor is challenging due to the high cost of sensory evaluation and the difficulty of connecting sensory experience to chemical composition. The main goal of this study was to identify the chemical drivers of sweetness and consumer liking for fresh strawberries (Fragaria × ananassa). Fruit of 148 strawberry samples from cultivars and breeding selections were grown and harvested over seven years and were subjected to both sensory and chemical analyses.

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  • * Initial tests in diverse species like tomato, dog, and wheat showed that K-seq achieved comparable genetic distance results to whole genome sequencing (WGS) and identified more SNPs than genotyping by sequencing (GBS) in tomatoes.
  • * The technology is user-friendly, cost-effective, and reproducible, making it accessible for various genetic studies without the need for specialized equipment.
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The global supply of vanilla extract is primarily sourced from the cured beans of the tropical orchid species Vanilla planifolia. Vanilla plants were collected from Mesoamerica, clonally propagated and globally distributed as part of the early spice trade. Today, the global food and beverage industry depends on descendants of these original plants that have not generally benefited from genetic improvement.

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Whole-genome resequencing provides information of great relevance for crop genetics, evolution, and breeding. Here, we present the first whole-genome resequencing study using seven eggplant () and one wild relative () accessions. These eight accessions were selected for displaying a high phenotypic and genetic diversity and for being the founder parents of an eggplant multiparent advanced generation intercrosses population.

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Plant domestication is the process of adapting plants to human use by selecting specific traits. The selection process often involves the modification of some components of the plant reproductive mechanisms. Allelic variants of genes associated with flowering time, vernalization, and the circadian clock are responsible for the adaptation of crops, such as rice, maize, barley, wheat, and tomato, to non-native latitudes.

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  • The study investigated the DNA methylome of the tetraploid switchgrass 'Alamo' using bisulfite sequencing to understand its interaction with non-coding RNAs like miRNAs and lncRNAs.
  • It was found that small interfering RNAs (siRNAs) enhance DNA methylation around specific gene sites, affecting the expression of genes and lncRNAs, with many genes linked to stimulus responses being hypomethylated in roots.
  • The research contributes important insights and genomic resources for future studies on epigenetics in switchgrass, a crucial biofuel crop.
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Cyantraniliprole is the second xylem-systemic active ingredient in the new anthranilic diamide class. Greenhouse (2006), growth chamber (2007), and field studies (2009-2010) were conducted to determine the efficacy of cyantraniliprole for managing Bemisia tabaci (Gennadius) biotype B and in interfering with transmission of tomato yellow leaf curl virus (TYLCV) by this whitefly. Cyantraniliprole applied as soil treatments (200 SC) or foliar sprays (100 OD) provided excellent adult whitefly control, TYLCV suppression, and reduced oviposition and nymph survival, comparable to current standards.

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