Environmental factors determining the survival of winter ticks (Dermacentor albipictus) at different life stages in Québec, Canada.

Ticks are responsible for large economic losses because of their impact on livestock and wildlife. In recent years, winter ticks (Dermacentor albipictus) have caused mass mortalities in moose (alces) populations of North America, leading to host mortality due to severe blood loss. During their off-host stages (i.

Comparison Between Etorphine-Xylazine with or Without Butorphanol and Butorphanol-Azaperone-Medetomidine For the Anesthesia of Free-Ranging Musk Ox ().

Historically, free-ranging musk oxen () were anesthetized with potent opioids such as etorphine, which are often associated with marked respiratory depression. The goal of this study was to investigate alternatives to the etorphine-xylazine combination (EtXy) traditionally used in this species. First, the potential benefit of postinduction butorphanol administrations to musk oxen anesthetized with EtXy was assessed.

Qiviut Trace and Macro Element Profile Reflects Muskox Population Trends.

Understanding the drivers influencing ungulate population dynamics is crucial for developing conservation and management strategies to support wildlife health. Trace and macro elements are vital for ungulate growth, reproduction and survival. Thus, the trajectory of wildlife populations may be associated with element imbalances.

Sporadic Events Have a Greater Influence on the Dynamics of Small, Isolated Populations Than Density Dependence and Environmental Conditions.

AbstractDensity dependence is often assumed in population dynamics, but its importance in small, isolated populations has been questioned. We evaluated the relative influence of density dependence, environmental conditions, and sporadic events (disease outbreaks and specialist predators) on annual population growth rate, annual female reproduction, and annual survival of juveniles and adult females in three populations of mountain ungulates. We analyzed long-term (30-47 years) individual-based data on two bighorn sheep populations and one mountain goat population in Alberta, Canada.

Of goats and heat, the differential impact of summer temperature on habitat selection and activity patterns in mountain goats of different ecotypes.

Climate change disproportionately affects northern and alpine environments, with faster rates of warming than the global average. Because alpine and northern species are particularly well adapted to cool temperatures, most species must modify their behavior when temperatures exceed a critical threshold. Evaluating how temperature increases affect species inhabiting northern and alpine environments is therefore essential to understand the effects of projected climate change on these ecosystems.

Morphological Traits Are Not Consistently Related to Population Size in Four Migratory Caribou Populations Across North America.

To develop effective management to maintain or restore populations of large herbivores, wildlife managers require sound empirical data on their variations in size and associated parameters. Many studies have highlighted links between morphological traits of individuals and population density; however, less attention has been devoted to whether or not morphological traits can reliably inform on population size in years when no population estimates are available. We evaluated the relationships between three morphological traits (hind foot length, body mass, and body fat) and population size interpolated over three decades, for four migratory caribou () herds in northern Canada and Alaska.

Resequencing of reindeer genomes provides clues to their docile habits.

Reindeer have long been served as vital subsistence resources for inhabitants of Arctic and subarctic regions owing to their domestication. However, the evolutionary relationships and divergence times among different reindeer populations, genetic traits that distinguish domesticated reindeer, and factors that contribute to their relative docility compared with that of other Cervidae specie, remain unclear. In this study, we sequenced the genomes of 32 individuals from wild and domestic reindeer populations that inhabit Arctic and subarctic regions.

Island demographics and trait associations in white-tailed deer.

When a population is isolated and composed of few individuals, genetic drift is the paramount evolutionary force and results in the loss of genetic diversity. Inbreeding might also occur, resulting in genomic regions that are identical by descent, manifesting as runs of homozygosity (ROHs) and the expression of recessive traits. Likewise, the genes underlying traits of interest can be revealed by comparing fixed SNPs and divergent haplotypes between affected and unaffected individuals.

Selection of summer feeding sites and food resources by female migratory caribou (Rangifer tarandus) determined using camera collars.

Migratory caribou (Rangifer tarandus) is a socioeconomically and culturally key species for northern communities in the Arctic, and most of its populations are experiencing a sharp decline. Female migratory caribou depend on the availability of summer habitat resources to meet the needs associated with lactation and the accumulation of fat reserves to survive when resources are less abundant. Because of the large scales at which habitat and resource data are usually available, information on how female migratory caribou select habitat and resources at fine scales in the wild is lacking.

Birth date determines early calf survival in migratory caribou.

The decline of most caribou (Rangifer tarandus) populations underlines the need to understand the determinants of key demographic parameters. In migratory caribou, we have limited information on rates and drivers of pre-weaning mortality. We fitted 60 pregnant females of the Rivière-aux-Feuilles caribou herd with GPS camera collars to track the survival of calves from birth to weaning in 2016-2018.

Chromosome-level assembly of the Rangifer tarandus genome and validation of cervid and bovid evolution insights.

Background: Genome assembly into chromosomes facilitates several analyses including cytogenetics, genomics and phylogenetics. Despite rapid development in bioinformatics, however, assembly beyond scaffolds remains challenging, especially in species without closely related well-assembled and available reference genomes. So far, four draft genomes of Rangifer tarandus (caribou or reindeer, a circumpolar distributed cervid species) have been published, but none with chromosome-level assembly.

Genomic health is dependent on long-term population demographic history.

Current genetic methods of population assessment in conservation biology have been challenged by genome-scale analyses due to their quantitatively novel insights. These analyses include assessments of runs-of-homozygosity (ROH), genomic evolutionary rate profiling (GERP), and mutational load. Here, we aim to elucidate the relationships between these measures using three divergent ungulates: white-tailed deer, caribou, and mountain goat.

Demographic history and conservation genomics of caribou () in Québec.

The loss of genetic diversity is a challenge many species are facing, with genomics being a potential tool to inform and prioritize decision-making. Most caribou () populations have experienced significant recent declines throughout Québec, Canada, and are considered of concern, threatened or endangered. Here, we calculated the ancestral and contemporary patterns of genomic diversity of five representative caribou populations and applied a comparative population genomics framework to assess the interplay between demographic events and genomic diversity.

Design and validation of a 63K genome-wide SNP-genotyping platform for caribou/reindeer (Rangifer tarandus).

Background: Development of large single nucleotide polymorphism (SNP) arrays can make genomic data promptly available for conservation problematic. Medium and high-density panels can be designed with sufficient coverage to offer a genome-wide perspective and the generated genotypes can be used to assess different genetic metrics related to population structure, relatedness, or inbreeding. SNP genotyping could also permit sexing samples with unknown associated metadata as it is often the case when using non-invasive sampling methods favored for endangered species.

Association of Environmental Factors with Seasonal Intensity of Erysipelothrix rhusiopathiae Seropositivity among Arctic Caribou.

Several caribou (Rangifer tarandus) populations have been declining concurrently with increases in infectious diseases in the Arctic. Erysipelothrix rhusiopathiae, a zoonotic bacterium, was first described in 2015 as a notable cause of illness and death among several Arctic wildlife species. We investigated epidemiologic and environmental factors associated with the seroprevalence of E.

Large herbivores trigger spatiotemporal changes in forest plant diversity.

Large herbivores can exert top-down control on terrestrial plant communities, but the magnitude, direction, and scale dependency of their impacts remain equivocal, especially in temperate and boreal forests, where multiple disturbances often interact. Using a unique, long-term, and replicated landscape experiment, we assessed the influence of a high density of white-tailed deer (Odocoileus virginianus) on the spatiotemporal dynamics of diversity, composition, and successional trajectories of understorey plant assemblages in recently logged boreal forests. This experiment provided a rare opportunity to test whether deer herbivory represents a direct filter on plant communities or if it mainly acts to suppress dominant plants, which, in turn, release other plant species from strong negative plant-plant interactions.

CNVs with adaptive potential in : genome architecture and new annotated assembly.

has experienced recent drastic population size reductions throughout its circumpolar distribution and preserving the species implies genetic diversity conservation. To facilitate genomic studies of the species populations, we improved the genome assembly by combining long read and linked read and obtained a new highly accurate and contiguous genome assembly made of 13,994 scaffolds (L90 = 131 scaffolds). Using de novo transcriptome assembly of RNA-sequencing reads and similarity with annotated human gene sequences, 17,394 robust gene models were identified.

Fluctuating optimum and temporally variable selection on breeding date in birds and mammals.

Temporal variation in natural selection is predicted to strongly impact the evolution and demography of natural populations, with consequences for the rate of adaptation, evolution of plasticity, and extinction risk. Most of the theory underlying these predictions assumes a moving optimum phenotype, with predictions expressed in terms of the temporal variance and autocorrelation of this optimum. However, empirical studies seldom estimate patterns of fluctuations of an optimum phenotype, precluding further progress in connecting theory with observations.

Adult survival in migratory caribou is negatively associated with MHC functional diversity.

Genes of the major histocompatibility complex (MHC) are involved in acquired immunity in vertebrates. Only a few studies have investigated the fitness consequences of MHC gene diversity in wild populations. Here, we looked at the association between annual survival and body mass and MHC-DRB exon 2 (MHC-DRB) genetic diversity, obtained from high-throughput sequencing, in two declining migratory caribou (Rangifer tarandus) herds.

Combining stable isotopes, morphological, and molecular analyses to reconstruct the diet of free-ranging consumers.

Accurate estimates of animal diet composition are essential to untangle complex interactions in food webs. Biomarkers and molecular tools are increasingly used to estimate diet, sometimes alongside traditional dietary tracing methods. Yet only a few empirical studies have compared the outcomes and potential gains of using a combination of these methods, especially using free-ranging animals with distinct foraging preferences.

Heritability Estimates of Antler and Body Traits in White-Tailed Deer (Odocoileus virginianus) From Genomic-Relatedness Matrices.

Estimating heritability (h2) is required to predict the response to selection and is useful in species that are managed or farmed using trait information. Estimating h2 in free-ranging populations is challenging due to the need for pedigrees; genomic-relatedness matrices (GRMs) circumvent this need and can be implemented in nearly any system where phenotypic and genome-wide single-nucleotide polymorphism (SNP) data are available. We estimated the heritability of 5 body and 3 antler traits in a free-ranging population of white-tailed deer (Odocoileus virginianus) on Anticosti Island, Quebec, Canada.