[genus]_[species]; Presenting phylogenies to facilitate synthesis.

Each published phylogeny is a potential contribution to the synthesis of the Tree of Life and countless downstream projects. Steps are needed for fully synthesizable science, but only a minority of studies achieve these. We here review the range of phylogenetic presentation and note aspects that hinder further analysis.

Evolutionary History and Ecology of () : A New Nearctic Mining Bee (Hymenoptera, Andrenidae) Species and Subgenus.

With about 1700 described species, the mining bee genus is a rapidly diversifying lineage and one of the most species-rich groups of bees. Recent phylogenomic advances have greatly improved our understanding of the phylogeny of the genus, yet many species still await description, subgeneric assignments that are in line with their evolutionary history, as well as study of their morphology and behavior. Here we provide a comprehensive account of a newly discovered species, n.

Lessons from assembling UCEs: A comparison of common methods and the case of Clavinomia (Halictidae).

Sequence data assembly is a foundational step in high-throughput sequencing, with untold consequences for downstream analyses. Despite this, few studies have interrogated the many methods for assembling phylogenomic UCE data for their comparative efficacy, or for how outputs may be impacted. We study this by comparing the most commonly used assembly methods for UCEs in the under-studied bee lineage Nomiinae and a representative sampling of relatives.

The evolutionary history of bees in time and space.

Bees are the most significant pollinators of flowering plants. This partnership began ca. 120 million years ago, but the uncertainty of how and when bees spread across the planet has greatly obscured investigations of this key mutualism.

Phylogenetic relationships and the evolution of host preferences in the largest clade of brood parasitic bees (Apidae: Nomadinae).

Brood parasites (also known as cleptoparasites) represent a substantial fraction of global bee diversity. Rather than constructing their own nests, these species instead invade those of host bees to lay their eggs. Larvae then hatch and consume the food provisions intended for the host's offspring.

Gene Tree Estimation Error with Ultraconserved Elements: An Empirical Study on Pseudapis Bees.

Summarizing individual gene trees to species phylogenies using two-step coalescent methods is now a standard strategy in the field of phylogenomics. However, practical implementations of summary methods suffer from gene tree estimation error, which is caused by various biological and analytical factors. Greatly understudied is the choice of gene tree inference method and downstream effects on species tree estimation for empirical data sets.

Two new species of Pseudapis Kirby, 1900 (Hymenoptera: Halictidae: Nomiinae) from Africa.

Two previously unknown species of the genus Pseudapis Kirby, 1900 are described and illustrated: Pseudapis neumayeri Bossert Pauly, sp. nov. (♂, ♀, Kenya, Tanzania), and P.

Pollinivory and the diversification dynamics of bees.

Pollinivory-the consumption of pollen rather than arthropod prey-is a defining feature of bees (Anthophila; the flower lovers). In virtually all bee species, larvae consume a diet composed of pollen mixed with nectar or floral oils. Bees arose from within a group of solitary, carnivorous, apoid wasps in the Early to Mid-Cretaceous, coincident with the rapid rise of flowering plants.

Combining transcriptomes and ultraconserved elements to illuminate the phylogeny of Apidae.

Two increasingly popular approaches to reconstruct the Tree of Life involve whole transcriptome sequencing and the target capture of ultraconserved elements (UCEs). Both methods can be used to generate large, multigene datasets for analysis of phylogenetic relationships in non-model organisms. While targeted exon sequencing across divergent lineages is now a standard method, it is still not clear if UCE data can be readily combined with published transcriptomes.

The impact of GC bias on phylogenetic accuracy using targeted enrichment phylogenomic data.

The field of sequence based phylogenetic analyses is currently being transformed by novel hybrid-based targeted enrichment methods, such as the use of ultraconserved elements (UCEs). Rather than analyzing relationships among organisms using a small number of genes, these methods now allow us to evaluate relationships with many hundreds to thousands of individual gene loci. However, the inclusion of thousands of loci does not necessarily overcome the long-standing challenge of incongruence among phylogenetic trees derived from different genes or gene regions.

The Cryptic Complex (Hymenoptera: Apidae) in Austria: Phylogeny, Distribution, Habitat Usage and a Climatic Characterization Based on COI Sequence Data.

The complex represents a group of three distinct but cryptic bumblebee species in Europe. With the advent of DNA-based identification methods, their species status was confirmed and the use of COI barcoding proved to be an especially useful tool for species identification within the group. Meanwhile, the identification based on morphology remains difficult and recent studies challenged the general distinguishability by revealing an important character to be unreliable.

The high alpine bee fauna (Hymenoptera: Apoidea) of the Zillertal Alps, Austria.

Bees from the Zemmgrund area in the Zillertal Alps (Austria, Tyrol) were collected and determined to investigate the species composition of the area. A total of 61 specimens were collected over a two year period; they represent 24 species from 8 genera. Building on these records, the first commented checklist for the area is presented, with notes on habitats and visited flowers.