Publications by authors named "Shunsuke Kita"

Introduction: Despite having a stably effectively vaccine for decades, the Measles virus (MV) still causes periodic outbreaks given its highly contagious nature and a consistent decline in immunization coverage, which was further exacerbated during the COVID-19 pandemic, leading to reduced immunization rates. Equally concerning, there are also no approved treatments for measles.

Areas Covered: Herein, the authors explore the current challenges of MV therapy discovery.

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Chitin is a polysaccharide composed of N-acetylglucosamine units that form highly crystalline structures in biological systems; however, the precise mechanism underlying its self-assembly in aqueous environments remains unclear. In this study, we demonstrated that N-acetyl chitohexaose (GN6), a chitin oligosaccharide with a degree of polymerization of six, uniquely undergoes thermally induced self-assembly into crystalline nanofibers and forms reversible hydrogels in water. Among chitin oligosaccharides ranging from monomer to hexamer, only GN6 exhibited gelation upon heating, which is attributed to its optimal molecular length and balanced hydrophilic-hydrophobic characteristics.

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A cure for chronic hepatitis B requires eliminating or permanently silencing covalently closed circular DNA (cccDNA). A pivotal target of this approach is the hepatitis B virus (HBV) X protein (HBx), which is a key factor that promotes transcription from cccDNA. However, the HBx structure remains unsolved.

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Hip joint contact force (HJCF) overloading is a primary mechanical cause of hip osteoarthritis. Hip adduction moment (HAM) is a surrogate measure for estimating HJCF. Gait modification, especially wider step-width (SW), can significantly decrease the peaks and impulses of HAM, suggesting a possible strategy for preventing joint overloading.

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Unlabelled: ARNAX is a synthetic nucleotide-based Toll-like receptor 3 (TLR3) ligand that specifically stimulates the TLR3/TIR domain-containing adaptor molecule 1 (TICAM-1) pathway without activating inflammatory responses. ARNAX activates cellular immunity via cross-presentation; hence, its practical application has been demonstrated in cancer immunotherapy. Given the importance of cellular immunity in virus infections, ARNAX is expected to be a more effective vaccine adjuvant for virus infections than alum, an adjuvant approved for human use that mainly enhances humoral immunity.

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Medical treatments using potent neutralizing SARS-CoV-2 antibodies have achieved remarkable improvements in clinical symptoms, changing the situation for the severity of COVID-19 patients. We previously reported an antibody, NT-108 with potent neutralizing activity. However, the structural and functional basis for the neutralizing activity of NT-108 has not yet been understood.

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Signal transducer and activator of transcription (STAT) family members mediate signaling in the Janus kinase (JAK)-STAT pathway and are activated by phosphorylation at a conserved tyrosine residue, resulting in dimerization through reciprocal interactions between the phosphotyrosine and a Src homology 2 (SH2) domain. Tyrosine-phosphorylated STAT (pY-STAT) then translocates to the nucleus to induce the expression of genes encoding antiviral proteins. Although the active and functional forms of STATs are conventionally considered to be dimers, STATs can undergo higher-order oligomerization, which is implicated in regulating transcriptional activity.

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Article Synopsis
  • Since 2019, SARS-CoV-2 has mutated, leading to various pandemic and epidemic waves that involve changes in its spike protein, which is key for the virus's entry into cells.
  • Researchers studied the spike proteins from variants BA.2.86 and JN.1, discovering structures where ACE2 receptor binds to the spike protein in both up and down conformations.
  • Their findings suggest that the down-conformation of the receptor-binding domain (RBD) is an important intermediate state that helps facilitate the virus's entry, with specific mutations like K356T impacting infectivity and resistance to neutralizing antibodies.
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  • A new variant of SARS-CoV-2, called EG.5.1, is spreading rapidly and has been studied using various scientific methods to understand its features.
  • Key mutations in EG.5.1, specifically S:F456L and ORF9b:I5T, enhance its viral fitness compared to other variants like XBB.1.5.
  • Structural differences were found in the spike proteins of EG.5.1 versus XBB.1.5, and the research helps us understand the evolution of emerging viruses that can affect human health.
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  • The emergence of a new Variant of Interest, XBB.1.5, is linked to mutations from the pre-existing variant XBB.1, specifically an S486P spike mutation and a nonsense mutation in ORF8.
  • Phylogenetic analysis indicates that XBB.1.5 maintains similar immune escape abilities compared to XBB.1, and structural studies reveal that the spike proteins of both variants are largely similar.
  • Research involving hamsters shows that the ORF8 nonsense mutation in XBB.1.5 reduces MHC suppression and results in lower virulence in this variant compared to XBB.1.
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  • SARS-CoV-2 is known for its rapid mutations, which allow it to evade neutralizing antibodies, a challenge highlighted by the reduced effectiveness of the antibody UT28K against the Omicron BA.1 variant.
  • Researchers designed a modified version called UT28K-RD, targeting specific mutations to restore its neutralizing capability against Omicron BA.1, and validated its effectiveness through various lab experiments.
  • The study showcases the successful design of antibodies tailored to combat viral mutations and suggests a promising direction for developing new treatments for highly mutable viruses like SARS-CoV-2.
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  • SARS-CoV-2 and dengue virus (DENV) are causing major health issues globally, with millions of new cases each year and a lack of effective treatments available.
  • Researchers discovered that 2-thiouridine (s2U) is a promising antiviral compound that can combat various positive-sense single-stranded RNA viruses, including DENV and SARS-CoV-2 variants like Omicron.
  • In animal studies, s2U showed potential in inhibiting viral RNA replication, leading to improved survival rates for mice infected with these viruses, highlighting its potential as a broad-spectrum antiviral agent.
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Introduction: Joint instability is a common finding of clinical importance in patients with knee disease. This literature review aimed to examine the evidence regarding the effect of orthosis management on joint instability in knee joint disease.

Methods: The detailed protocol for this study was published in the International Prospective Register of Systematic Reviews in the field of health and social welfare (CRD 42022335360).

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Excessive hip flexion torque to prioritize leg swings in the elderly is likely to be a factor that reduces their propulsive force and gait stability, but the mechanism is not clear. To understand the mechanism, we investigated how propulsive force, hip flexion torque, and margin of stability (MoS) change when only the hip spring stiffness is increased without changing the walking speed in the simple walking model, and verified whether the relationship holds in human walking. The results showed that at walking speeds between 0.

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Article Synopsis
  • SARS-CoV-2 Omicron subvariants have developed the ability to evade detection by certain antibodies that target their receptor-binding sites (RBS).
  • Researchers identified a key area, Y489, that is vulnerable to broadly neutralizing antibodies and revealed how multiple antibodies interact with both Y489 and F486, linking this to the emergence of resistant subvariants.
  • A newly designed antibody (NIV-10/FD03) effectively neutralized the XBB variant and shows promise for developing therapies resistant to viral evolution and escape mechanisms.
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  • In late 2022, the SARS-CoV-2 Omicron subvariant XBB emerged from the recombination of two existing BA.2 lineages, BJ.1 and BM.1.1.1, during the summer of 2022.
  • XBB.1 shows strong resistance to vaccines designed for BA.2/5 and has increased fusogenicity, meaning it can fuse with human cells more efficiently due to changes in its spike protein.
  • Research indicates that while XBB.1 is pathogenic, its disease-causing potential in male hamsters is similar to or lower than that of the BA.2.75 variant, marking a notable adaptation in virus evolution through recombination.
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The biomechanical variation in the knee during walking that accompanies medial meniscal radial tears stemming from knee osteoarthritis (OA) has not been explored. This study introduced a finite element musculoskeletal model using concurrent lower limb musculoskeletal dynamics and knee joint finite element analysis in a single framework and expanded the models to include knees with medial meniscal radial tears and total medial meniscectomy. The radial tears involved three locations: anterior horn, midbody, and posterior horn with grades of 33%, 50%, and 83% of the meniscus width.

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Article Synopsis
  • The SARS-CoV-2 Omicron BA.2.75 variant, emerging in May 2022, is a distinct descendant of BA.2 and shows a greater reproductive number than the dominant BA.5 variant.
  • BA.2.75 demonstrates different responses to vaccines and antibodies, retaining antiviral drug effectiveness but showing variable antibody sensitivity due to unique genetic changes.
  • This variant has enhanced ability to bind to human receptors, increased growth efficiency in lung cells, and heightened pathogenicity in hamsters, indicating a potentially greater risk to global health compared to BA.5.
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Galanin is a neuropeptide expressed in the central and peripheral nervous systems, where it regulates various processes including neuroendocrine release, cognition, and nerve regeneration. Three G-protein coupled receptors (GPCRs) for galanin have been discovered, which is the focus of efforts to treat diseases including Alzheimer's disease, anxiety, and addiction. To understand the basis of the ligand preferences of the receptors and to assist structure-based drug design, we used cryo-electron microscopy (cryo-EM) to solve the molecular structure of GALR2 bound to galanin and a cognate heterotrimeric G-protein, providing a molecular view of the neuropeptide binding site.

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Background: Accumulating evidence indicates that abnormal foot posture are risk factors for knee osteoarthritis (OA). However, the relationship between foot posture and tibiofemoral contact force (CF) during habitual weight-bearing activities remains unclear. This study aimed to determine the association between tibiofemoral CF and foot posture while walking.

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Flat-flexible shoes with unique characteristics, such as low pitch and flexibility, can increase the efficiency of ankle energy and running performance. If flat-flexible shoes have the same effect during walking, they could be used for gait training. This study aimed to investigate the effects of flat-flexible shoes on the kinematics and kinetics of the lower limb.

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Article Synopsis
  • Researchers have developed many effective antibodies for treating SARS-CoV-2, but their effectiveness is declining against new variants like Omicron.* -
  • A particular antibody, UT28K, was found in individuals who recovered from severe COVID-19 and has shown strong neutralizing effects against the virus, even though its efficacy against Omicron is somewhat limited.* -
  • Structural studies suggest that UT28K binds effectively to the virus, and it's unlikely that a resistant variant of SARS-CoV-2 will emerge that could outcompete existing strains.*
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Potent neutralizing SARS-CoV-2 antibodies often target the spike protein receptor-binding site (RBS), but the variability of RBS epitopes hampers broad neutralization of multiple sarbecoviruses and drifted viruses. Here, using humanized mice, we identified an RBS antibody with a germline V gene that potently neutralized SARS-related coronaviruses, including SARS-CoV and SARS-CoV-2 variants. X-ray crystallography revealed coordinated recognition by the heavy chain of non-RBS conserved sites and the light chain of RBS with a binding angle mimicking the angiotensin-converting enzyme 2 (ACE2) receptor.

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The functional importance of trunk muscle strength for running movement is widely recognised, but the kinematic effects of undertaking specific training are unclear. This study investigated the change in joint angle and its variability during running following trunk muscle training. Eighteen young female and novice runners participated.

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To develop methodology to predict the potential druggability of middle molecules, we examined the structure, solubility, and permeability relationships of a diverse library (HKDL ver.1) consisting of 510 molecules (359 natural product derivatives, 76 non-natural products, 46 natural products, and 29 non-natural product derivatives). The library included peptides, depsipeptides, macrolides, and lignans, and 476 of the 510 compounds had a molecular weight in the range of 500-2000 Da.

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