A high-throughput phenotyping dataset for GWAS analysis of maize under combined drought and heat stress.

This dataset was generated to characterize the physiological and morphological mechanisms underlying tolerance and resilience to combined drought and heat stress using a panel of 106 Mediterranean maize inbred lines. To achieve this, high-throughput non-invasive phenotyping combined with genome-wide association analysis was applied to accurately capture the dynamic responses of the maize lines to stress and to dissect the genetic basis of maize tolerance and resilience. Two experiments were conducted under control (25/20 °C, 70 % field capacity (FC)) and stress conditions (35/25 °C, 30 % FC).

Lipids signature shift in Zea Mays L. resistant and susceptible inbred lines in response to Fusarium verticillioides.

Background: Fusarium Ear Rot is one of the major diseases affecting maize worldwide, causing decreases in yield and fumonisins accumulation in crops. In this framework, identifying resistance traits in plants is of great interest for breeding programs. To delve deeperr into the role of lipids on resistance to Fusarium Ear Rot, a lipidomic study has been performed using resistant and susceptible maize recombinant inbred lines.

Genotype-dependent response to water deficit: increases in maize cell wall digestibility occurs through reducing both p-coumaric acid and lignification of the rind.

Introduction: The compositional dynamics of the cell wall are influenced by drought, and it has been demonstrated that water deficit induces significant changes in its main components. Moreover, changes in cell wall concentration and distribution in response to water deficit affect maize degradability.

Material And Methods: This study presents a histological and biochemical analysis of thirteen maize inbred lines, evaluated over two years in Pobra de Brollón (Spain) and Mauguio (France) under contrasting water availability conditions.

Long-distance gene flow and recombination shape the evolutionary history of a maize pathogen.

The evolutionary history of crop pathogens is shaped by a complex interaction of natural and anthropogenic factors. The fungus causes maize anthracnose which results in significant yield losses worldwide. We conducted a comprehensive investigation into the evolutionary genomics of using a collection of 212 isolates from 17 countries across five continents.

Genome-Wide Association Study and Genomic Predictions for Hydroxycinnamate Concentrations in Maize Stover.

Hydroxycinnamates, like ferulate (FA) and -coumarate (CA), are important components of maize cell walls, which influence pest resistance, ruminal digestibility, and biofuel production. Increasing their concentration has been linked to increased pest resistance, but also may lead to a decrease in nutritional value or bioethanol production efficiency. Therefore, improving forage quality or biofuel production without compromising plant resistance and a thorough understanding of the biosynthesis and deposition of these compounds is necessary, especially in stover, which is the feedstock for second-generation biofuel production and determines animal forage quality.

Assessing the success of breeding maize inbred lines with contrasting diferulate concentrations.

Background: The crosslinking of maize cell wall components, particularly mediated by the formation of ferulic acid dimers or diferulates, has been associated with important crop valorization traits such as increased pest resistance, lower forage digestibility, or reduced bioethanol production. However, these relationships were based on studies performed using diverse unrelated inbred lines and/or populations, so genetic background could interfere on these associations.

Results: In the present research, the success of a pedigree selection program aimed to obtain inbred lines from a common antecessor with contrasting diferulate concentration was evaluated.

Maize kernel metabolome involved in resistance to fusarium ear rot and fumonisin contamination.

poses a threat to worldwide maize production due to its ability to infect maize kernel and synthesize fumonisins that can be accumulated above safety levels for humans and animals. Maize breeding has been proposed as key tool to decrease kernel contamination with fumonisins, but metabolic studies complementary to genomic approaches are necessary to disclose the complexity of maize resistance. An untargeted metabolomic study was proposed using inbreds genetically related but with contrasting levels of resistance in order to uncover pathways implicated in resistance to Fusarium ear rot (FER) and fumonisin contamination in the maize kernel and to look for possible biomarkers.

Inbred Selection for Increased Resistance to Kernel Contamination with Fumonisins.

In temperate world-wide regions, maize kernels are often infected with the fumonisin-producing fungus which poses food and feed threats to animals and humans. As maize breeding has been revealed as one of the main tools with which to reduce kernel contamination with fumonisins, a pedigree selection program for increased resistance to Fusarium ear rot (FER), a trait highly correlated with kernel fumonisin content, was initiated in 2014 with the aim of obtaining inbred lines (named EPFUM) with resistance to kernel contamination with fumonisins and adapted to our environmental conditions. The new released EPFUM inbreds, their parental inbreds, hybrids involving crosses of one or two EPFUM inbreds, as well as commercial hybrids were evaluated in the current study.

Genomics and Pathways Involved in Maize Resistance to Ear Rot and Kernel Contamination With Fumonisins.

is a causal agent of maize ear rot and produces fumonisins, which are mycotoxins that are toxic to animals and humans. In this study, quantitative trait loci (QTLs) and bulk-segregant RNA-seq approaches were used to uncover genomic regions and pathways involved in resistance to ear rot (FER) and to fumonisin accumulation in maize kernels. Genomic regions at bins 4.

Cell Wall Composition Impacts Structural Characteristics of the Stems and Thereby the Biomass Yield.

Maize stalks support leaves and reproductive structures and functionally support water and nutrient transport; besides, their anatomical and biochemical characteristics have been described as a plant defense against stress, also impacting economically important applications. In this study, we evaluated agronomical and stem description traits in a subset of maize inbred lines that showed variability for cell wall composition in the internodes. Overall, a great proportion of lignin subunit G and a low concentration of -coumaric acid and lignin subunit S are beneficial for greater rind puncture resistance and taller plants, with a greater biomass yield.

Genomics of maize resistance to kernel contamination with fumonisins using a multiparental advanced generation InterCross maize population (MAGIC).

Maize kernel is exposed to several fungal species, most notably Fusarium verticillioides, which can contaminate maize kernels with fumonisins. In an effort to increase genetic gains and avoid the laborious tasks of conventional breeding, the use of marker-assisted selection or genomic selection programs was proposed. To this end, in the present study a Genome Wide Association Study (GWAS) was performed on 339 RILs of a Multiparental Advanced Generation InterCross (MAGIC) population that had previously been used to locate Quantitative Trait Locus (QTL) for resistance to Fusarium Ear Rot (FER).

Elucidating the multifunctional role of the cell wall components in the maize exploitation.

Background: Besides the use of maize grain as food and feed, maize stover can be a profitable by-product for cellulosic ethanol production, whereas the whole plant can be used for silage production. However, yield is reduced by pest damages, stem corn borers being one of the most important yield constraints. Overall, cell wall composition is key in determining the quality of maize biomass, as well as pest resistance.

Elucidating compositional factors of maize cell walls contributing to stalk strength and lodging resistance.

Lodging is one of the causes of maize (Zea mays L.) production losses worldwide and, at least, the resistance to stalk lodging has been positively correlated with stalk strength. In order to elucidate the putative relationship between cell wall, stalk strength and lodging resistance, twelve maize inbreds varying in rind penetration strength and lodging resistance were characterized for cell wall composition and structure.

Maize Resistance to Stem Borers Can Be Modulated by Systemic Maize Responses to Long-Term Stem Tunneling.

Limited attention has been paid to maize ( L.) resistance induced by corn borer damage, although evidence shows that induced defenses have lower resource allocation costs than constitutive defenses. Maize responses to short- and long-term feeding by the Mediterranean corn borer (MCB, ) have been previously studied, but the suggested differences between responses could be due to experimental differences.

Unraveling the role of maize (Zea mays L.) cell-wall phenylpropanoids in stem-borer resistance.

The cell wall putatively plays a role in host-plant resistance to phytopathogens. Here, we investigated which cell wall-bound phenolic compounds have determining roles in maize (Zea mays) resistance to attack by the Mediterranean corn borer Sesamia nonagrioides (Lefèbvre). Diverse sets of maize genotypes having contrasting hydroxycinnamate contents and borer resistance levels were evaluated.

Genomics of Maize Resistance to Fusarium Ear Rot and Fumonisin Contamination.

Food contamination with mycotoxins is a worldwide concern, because these toxins produced by several fungal species have detrimental effects on animal and/or human health. In maize, fumonisins are among the toxins with the highest threatening potential because they are mainly produced by , which is distributed worldwide. Plant breeding has emerged as an effective and environmentally safe method to reduce fumonisin levels in maize kernels, but although phenotypic selection has proved effective for improving resistance to fumonisin contamination, further resources should be mobilized to meet farmers' needs.

Mapping of resistance to corn borers in a MAGIC population of maize.

Background: Corn borers constitute an important pest of maize around the world; in particular Sesamia nonagrioides Lefèbvre, named Mediterranean corn borer (MCB), causes important losses in Southern Europe. Methods of selection can be combined with transgenic approaches to increase the efficiency and durability of the resistance to corn borers. Previous studies of the genetic factors involved in resistance to MCB have been carried out using bi-parental populations that have low resolution or using association inbred panels that have a low power to detect rare alleles.

Effect of Long-Term Feeding by Borers on the Antibiotic Properties of Corn Stems.

Plant long-term response against chewing insects could become stronger than initial reactions and even turn into systemic. The objectives of the present study were 1) to evaluate whether the long-running attack to the stem by corn borers can improve the stem antibiotic properties; 2) to check whether hydroxycinnamic acids could be involved in this antibiotic response; 3) and to check whether elicitation by Sesamia nonagrioides Lef. (Lepidoptera: Noctuidae) regurgitant could activate long-term plant responses.

Maize Stem Response to Long-Term Attack by .

Plants defend themselves against herbivores by activating a plethora of genetic and biochemical mechanisms aimed at reducing plant damage and insect survival. The short-term plant response to insect attack is well understood, but less is known about the maintenance of this response over time. We performed transcriptomic and metabolomics analyses in order to identify genes and metabolites involved in the long-term response of maize to attack by the corn borer .

Chemical Changes during Maize Tissue Aging and Its Relationship with Mediterranean Corn Borer Resistance.

The Mediterranean corn borer (MCB), Sesamia nonagrioides Lef, is an important pest of maize in temperate areas, causing significant stalk lodging and yield losses. The main goals of this study were to determine possible changes in chemical traits (phenols, flavonoids, anthocyanins, sugars, fibers, and lignin) during plant development after the flowering stage and to assess how those traits may differ in diverse genotypes of maize, such as MCB resistant and susceptible. Higher values for some particular traits in more mature tissues seemed to increase their effectiveness against the MCB attack.

Defensive changes in maize leaves induced by feeding of Mediterranean corn borer larvae.

Background: Plants can respond to insect attack via defense mechanisms that reduce insect performance. In this study, we examined the effects of several treatments applied to two maize genotypes (one resistant, one susceptible) on the subsequent growth and survival of Sesamia nonagrioides Lef. (Mediterranean corn borer, MCB) larvae.