Publications by authors named "Revathi Balasubramanian"

Morphogenesis of the anterior segment (AS) is crucial for healthy ocular physiology and vision but is only partially understood. The Schlemm's canal (SC) and trabecular meshwork (TM) are essential drainage tissues within the AS, and their proper development and function are critical for maintaining normal intraocular pressure; abnormalities in either tissue can result in elevated pressure and glaucoma. Here, we use single-cell transcriptomic profiling to provide high-resolution molecular detail of AS development with a particular focus on SC and TM.

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Intraocular pressure is tightly regulated by the conventional outflow tissues, preventing ocular hypertension that leads to neurodegeneration of the optic nerve, or glaucoma. Although macrophages reside throughout the conventional outflow tract, their role in regulating intraocular pressure remains unknown. Using macrophage lineage tracing approaches, we uncovered a dual macrophage ontogeny with distinct spatial organizations across the mouse lifespan.

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Polymorphisms in Nos3 increase risk for glaucoma, the leading cause of irreversible blindness worldwide. A key modifiable risk factor for glaucoma is intraocular pressure (IOP), which is regulated by NO - a product of nitric oxide synthase 3 (encoded by Nos3) - in Schlemm's canal of the conventional outflow pathway. We studied the effects of a conditional, endothelial cell-specific postnatal deletion of Nos3 (Endo-SclCre-ERT;Nos3fl/fl) on tissues of the outflow pathway.

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Since the trabecular meshwork (TM) is central to intraocular pressure (IOP) regulation and glaucoma, a deeper understanding of its genomic landscape is needed. We present a multimodal, single-cell resolution analysis of mouse limbal cells (includes TM). In total, we sequenced 9,394 wild-type TM cell transcriptomes.

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Schlemm's canal endothelial cells (SECs) serve as the final barrier to aqueous humor (AQH) drainage from the eye. SECs adjust permeability to AQH outflow to modulate intraocular pressure (IOP). The broad identification of IOP-related genes implicates SECs in glaucoma.

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Article Synopsis
  • Schlemm's canal (SC) plays a crucial role in regulating intraocular pressure, but its detailed biology is not fully understood, leading researchers to conduct extensive RNA sequencing on significant numbers of Schlemm's canal endothelial cells (SECs).
  • The study identified three distinct molecular classes of SECs, differentiating between the inner and outer walls, and discovered variations in the inner wall cells that suggest their functions may be influenced by their local environment.
  • Findings highlight the importance of cell junctions in fluid permeability and reveal interactions between SECs and adjacent trabecular meshwork cells, laying a new molecular groundwork for understanding glaucomatous processes and potential treatments.
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The exact sites and molecules that determine resistance to aqueous humor drainage and control intraocular pressure (IOP) need further elaboration. Proposed sites include the inner wall of Schlemms's canal and the juxtacanalicular trabecular meshwork ocular drainage tissues. The adherens junctions (AJs) of Schlemm's canal endothelial cells (SECs) must both preserve the blood-aqueous humor (AQH) barrier and be conducive to AQH drainage.

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Article Synopsis
  • Schlemm's canal (SC) plays a crucial role in regulating intraocular pressure, but its properties and functions need further investigation, particularly the different types of endothelial cells (SECs) in its inner and outer walls.
  • The study utilized bulk RNA sequencing and single-cell RNA sequencing on SECs to identify molecular characteristics, confirming a lymphatic phenotype predominate in SC and highlighting the importance of cell junctions in fluid permeability.
  • The research identifies three distinct classes of SECs, reveals their interactions with trabecular meshwork cells, and lays a molecular groundwork for understanding and treating conditions like glaucoma.
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In albinism, aberrations in the ipsi-/contralateral retinal ganglion cell (RGC) ratio compromise the functional integrity of the binocular circuit. Here, we focus on the mouse ciliary margin zone (CMZ), a neurogenic niche at the embryonic peripheral retina, to investigate developmental processes regulating RGC neurogenesis and identity acquisition. We found that the mouse ventral CMZ generates predominantly ipsilaterally projecting RGCs, but this output is altered in the albino visual system because of CyclinD2 downregulation and disturbed timing of the cell cycle.

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Article Synopsis
  • The developing vertebrate eye cup consists of three main parts: the neural retina (NR), retinal pigmented epithelium (RPE), and ciliary margin (CM).
  • Single-cell analysis indicates that fibroblast growth factor (FGF) signaling is crucial for maintaining the stem cell-like properties of the CM, while Wnt signaling plays a pivotal role in differentiating the NR into CM or RPE based on FGF levels.
  • The research highlights that the relationship between FGF and Wnt signaling is essential for the transition from NR to CM during eye development, revealing a complex regulatory system that influences retinal formation.
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Variants in the LIM homeobox transcription factor 1-beta () gene predispose individuals to elevated intraocular pressure (IOP), a key risk factor for glaucoma. However, the effect of mutations varies widely between individuals. To better understand the mechanisms underlying LMX1B-related phenotypes and individual differences, we backcrossed the (also known as ) allele onto the C57BL/6J (B6), 129/Sj (129), C3A/BLiA- /J (C3H) and DBA/2J- (D2-G) mouse strain backgrounds.

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Intraocular pressure-sensitive retinal ganglion cell degeneration is a hallmark of glaucoma, the leading cause of irreversible blindness. Here, we used RNA-sequencing and metabolomics to examine early glaucoma in DBA/2J mice. We demonstrate gene expression changes that significantly impact pathways mediating the metabolism and transport of glucose and pyruvate.

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In mammalian albinism, disrupted melanogenesis in the retinal pigment epithelium (RPE) is associated with fewer retinal ganglion cells (RGCs) projecting ipsilaterally to the brain, resulting in numerous abnormalities in the retina and visual pathway, especially binocular vision. To further understand the molecular link between disrupted RPE and a reduced ipsilateral RGC projection in albinism, we compared gene expression in the embryonic albino and pigmented mouse RPE. We found that the Wnt pathway, which directs peripheral retinal differentiation and, generally, cell proliferation, is dysregulated in the albino RPE.

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Pluripotent stem cells (PSCs) could provide a powerful system to model development of the human esophagus, whose distinct tissue organization compared to rodent esophagus suggests that developmental mechanisms may not be conserved between species. We therefore established an efficient protocol for generating esophageal progenitor cells (EPCs) from human PSCs. We found that inhibition of TGF-ß and BMP signaling is required for sequential specification of EPCs, which can be further purified using cell-surface markers.

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Amacrine cells are the most diverse group of retinal neurons. Various subtypes of amacrine interneurons mediate a vast majority of image forming and non-image forming visual functions. The transcriptional regulation governing the development of individual amacrine cell subtypes is not well understood.

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The diencephalon is the primary relay network transmitting sensory information to the anterior forebrain. During development, distinct progenitor domains in the diencephalon give rise to the pretectum (p1), the thalamus and epithalamus (p2), and the prethalamus (p3), respectively. Shh plays a significant role in establishing the progenitor domains.

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Fibroblast growth factors (FGFs) have long been attributed to influence morphogenesis in embryonic development. Signaling by FGF morphogen encodes positional identity of tissues by creating a concentration gradient over the developing embryo. Various mechanisms that influence the development of such gradient have been elucidated in the recent past.

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Themammalian retina containsmultiple neurons, each of which contributes differentially to visual processing. Of these retinal neurons, amacrine cells have recently come to prime light since they facilitate majority of visual processing that takes place in the retina. Amacrine cells are also the most diverse group of neurons in the retina, classified majorly based on the neurotransmitter type they express and morphology of their dendritic arbors.

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LHX9 is a LIM-homeodomain transcription factor essential for the development of gonads, spinal cord interneurons, and thalamic neurons to name a few. We recently reported the expression of LHX9 in retinal amacrine cells during development. In this study, we generated an Lhx9-GFPCreER(T) (2) (GCE) knock-in mouse line by knocking-in a GCE cassette at the Lhx9 locus, thus inactivating endogenous Lhx9.

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LIM-homeodomain (LIM-HD) transcription factors have been extensively studied for their role in the development of the central nervous system. Their function is key to several developmental events like cell proliferation, differentiation and subtype specification. However, their roles in retinal neurogenesis remain largely unknown.

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Synopsis of recent research by authors named "Revathi Balasubramanian"

  • - Revathi Balasubramanian's research primarily focuses on the cellular and molecular mechanisms involved in intraocular pressure regulation, particularly relating to Schlemm's canal and its endothelial cells, highlighting the complexity of aqueous humor drainage and its role in glaucoma.
  • - Recent studies include the transcriptomic profiling of Schlemm's canal cells, revealing their lymphatic-biased identity and multiple distinct states, as well as investigating the role of FYN in modulating aqueous humor outflow and intraocular pressure through VE-cadherin phosphorylation.
  • - Balasubramanian's work also explores neurogenesis in the retina, particularly the impact of CyclinD2 on retinal ganglion cell differentiation in albinism, emphasizing the effect of genetic background on glaucoma phenotypes and the metabolic changes associated with retinal degeneration in glaucoma.