Publications by authors named "Rakesh Choudhary"

Effective forecasting of the Water Quality Index (WQI) considerably impacts water resource management as well as public health safety. This study proposes a new approach for WQI forecasting using stacked regression ensemble modeling integrated with SHAP (Shapley Additive explanations), a form of Explainable Artificial Intelligence (XAI). The model was developed using a dataset of 1,987 water quality samples from Indian rivers (2005-2014), processed through six optimized machine learning algorithms: XGBoost, CatBoost, Random Forest, Gradient Boosting, Extra Trees, and AdaBoost, combined using Linear Regression as the meta-learner.

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Article Synopsis
  • The study discusses AZD3152, a monoclonal antibody created to neutralize SARS-CoV-2 and enhance effectiveness against new variants that can resist other treatments.
  • AZD3152 targets a specific part of the virus's spike protein, blocking its ability to bind to human cells and effectively neutralizes various variants, including Omicron, but struggles against certain XBB subvariants.
  • In animal trials, AZD3152 helped protect hamsters from severe symptoms and lung issues, and initial human trials suggest it is safe and may offer long-lasting protection against certain strains of COVID-19.
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We report a case of interposition of a broken trochanteric wire in the hip joint. This caused early wear of the prosthesis and dislocation of the Charnley total hip arthroplasty. The patient was treated with a revision total hip arthroplasty.

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Caseinolytic protein, ClpC is a general stress protein which belongs to the heat shock protein HSP100 family of molecular chaperones. Some of the Clp group proteins have been identified as having a role in the pathogenesis of many bacteria. The Mycobacterium tuberculosis genome demonstrates the presence of a ClpC homolog, ClpC1.

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A prospective clinical study of first metatarsophalangeal joint arthrodesis using memory compression staples is presented. In 27 patients, 30 feet underwent surgery. There were 24 women and 3 men, with a mean age of 61.

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The production of correctly folded protein in Escherichia coli is often challenging because of aggregation of the overexpressed protein into inclusion bodies. Although a number of general and protein-specific techniques are available, their effectiveness varies widely. We report a novel method for enhancing the solubility of overexpressed proteins.

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About 10% of the coding sequence of Mycobacterium tuberculosis corresponds to hitherto unknown members of the PE and PPE protein families which display significant sequence and length variation at their C-terminal region. It has been suggested that this could possibly represent a rich source of antigenic variation within the pathogen. We describe the purification and biophysical characterization of the recombinant PPE protein coded by hypothetical ORF Rv2430c, a member of the PPE gene family that was earlier shown to induce a strong B cell response.

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The variation in sequence and length in the C-terminal region among members of the unique PE (Pro-Glu) and PPE (Pro-Pro-Glu) protein families of Mycobacterium tuberculosis is a likely source of antigenic variation, giving rise to the speculation that these protein families could be immunologically important. Based on in silico analysis, we selected a hypothetical open reading frame (ORF) encoding a protein belonging to the PPE family and having epitopes with predictably higher antigenic indexes. Reverse transcriptase PCR using total RNA extracted from in vitro-cultured M.

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The World Health Organization has identified India as a major hot-spot region for Mycobacterium tuberculosis infection. We have characterized the sequences of the loci associated with multidrug resistance in 126 clinical isolates of M. tuberculosis from India to identify the respective mutations.

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