Publications by authors named "Felix Machin"

Oxaliplatin-induced peripheral neurotoxicity (OIPN) represents a major challenge in cancer therapy, characterized by dorsal root ganglia (DRG) inflammation and disruption of neuro-glio-vascular unit function. In this study, we investigated the involvement of the scaffold protein IQ Motif Containing GTPase Activating Protein 1 (IQGAP1) and dehydropeptidase-1 (DPEP1) in the DRG response to oxaliplatin (OxPt) and the modulatory effect of cilastatin. Behavioral assessment showed a robust nocifensive response to cold stimuli in OxPt-treated rats, attenuated by cilastatin co-treatment.

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Precise double-strand break (DSB) repair is paramount for genome stability. Homologous recombination (HR) is preferred to repair DSBs when a nearby sister chromatid ensures an error-free template. In Saccharomyces cerevisiae, this preference extends into anaphase and telophase (late mitosis; late-M) despite sister chromatids having been pulled apart.

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Background: Two major types of cell division occur in eukaryotic cells regarding the dismantlement or not of the nuclear envelope (NE) in mitosis, open and closed mitosis, respectively. In the budding yeast Saccharomyces cerevisiae, the prototypical model for closed mitosis, the Nem1-Spo7 phosphatase complex, which regulates lipid metabolism, plays a key role in coordinating NE expansion throughout the cell cycle. Indeed, Nem1 depletion leads to abnormal NE evaginations in interphase, which protrude the ribosomal DNA (rDNA) and the nucleolus.

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Article Synopsis
  • Naphthoquinones are found in various natural cytotoxic compounds and can work alone or with other drug components to enhance their effects.
  • The study described the creation of new potent cytotoxic compounds by fusing naphthoquinones with oxazepines, leading to compounds with distinct mechanisms of action.
  • Two promising compounds, CM-568 and CM-728, showed strong cytotoxic effects on yeast cells, revealing different roles of reactive oxygen species in their action and suggesting potential use in pharmacology due to their unique effects on cell cycle and programmed death.
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Background: Peripheral neuropathy (PN) constitutes a dose-limiting side effect of oxaliplatin chemotherapy that often compromises the efficacy of antineoplastic treatments. Sensory neurons damage in dorsal root ganglia (DRG) are the cellular substrate of PN complex molecular origin. Dehydropeptidase-1 (DPEP1) inhibitors have shown to avoid platin-induced nephrotoxicity without compromising its anticancer efficiency.

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To explore new compounds with antitumour activity, fifteen phenolic -tripterpenes isolated from Celastraceae species, , and , have been studied. Their chemical structures were elucidated through spectroscopic and spectrometric techniques, resulting in the identification of three novel chemical compounds. Evaluation on human tumour cell lines (A549 and SW1573, non-small cell lung; HBL-100 and T-47D, breast; HeLa, cervix, and WiDr, colon) revealed that three compounds, named 6-oxo-pristimerol, demethyl-zeylasteral, and zeylasteral, exhibited significant activity (GI ranging from 0.

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Precise double-strand break (DSB) repair is a paramount for genome stability. Homologous recombination (HR) repairs DSBs when cyclin-dependent kinase (CDK) activity is high, which correlates with the availability of the sister chromatid as a template. However, anaphase and telophase are paradoxical scenarios since high CDK favors HR despite sister chromatids being no longer aligned.

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CRISPR/Cas9 gene editing technology has revolutionized genetic engineering. However, the nuclear dynamics of Cas9 in eukaryotic cells, particularly in the model organism , remains poorly understood. Here, we constructed yeast strains expressing fluorescently tagged Cas9 variants, revealing their accumulation in the nucleus over time.

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The COVID-19 pandemic caused by SARS-CoV-2 has underscored the need for rapid and accurate diagnostic methods. Reverse Transcription Loop-Mediated Isothermal Amplification (RT-LAMP) has emerged as a promising molecular tool in least developed countries due to its simplicity, speed, and sensitivity. Nevertheless, reliable SARS-CoV-2 detection can be challenged by the chain custody of the samples.

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Article Synopsis
  • A library of 35 coumarin derivatives was synthesized, with 7 showing promising inhibitory activity against DNA polymerase and potential antiproliferative effects.
  • The most effective derivatives included 4-(chloromethyl)-5,7-dihydroxy-chromen-2-one and 4-((acetylthio)methyl)-2-oxo-chromen-7-yl acetate, with IC values significantly lower than 250 μM.
  • Additionally, certain derivatives caused DNA damage and exhibited antiretroviral properties, particularly highlighting the -alkenylepoxy and -butylepoxy functional groups as key components contributing to their activities.
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The morphology of the nucleus is roughly spherical in most eukaryotic cells. However, this organelle shape needs to change as the cell travels through narrow intercellular spaces during cell migration and during cell division in organisms that undergo closed mitosis, i.e.

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Elucidating the mechanism of action of an antifungal or cytotoxic compound is a time-consuming process. Yeast chemogenomic profiling provides a compelling solution to the problem but is experimentally complex. Here, we demonstrate the use of a highly simplified yeast chemical genetic assay comprising just 89 yeast deletion strains, each diagnostic for a specific mechanism of action.

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The ribosomal DNA (rDNA) array of has served as a model to address chromosome organization. In cells arrested before anaphase (mid-M), the rDNA acquires a highly structured chromosomal organization referred to as the rDNA loop, whose length can double the cell diameter. Previous works established that complexes such as condensin and cohesin are essential to attain this structure.

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The key role of Topoisomerase II (Top2) is the removal of topological intertwines between sister chromatids. In yeast, inactivation of Top2 brings about distinct cell cycle responses. In the case of the conditional top2-5 allele, interphase and mitosis progress on schedule but cells suffer from a chromosome segregation catastrophe.

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Joint molecules (JMs) are intermediates of homologous recombination (HR). JMs rejoin sister or homolog chromosomes and must be removed timely to allow segregation in anaphase. Current models pinpoint Holliday junctions (HJs) as a central JM.

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Article Synopsis
  • Researchers synthesized a library of embelin derivatives using a multicomponent reaction involving embelin, aldehydes, and various privileged structures with InCl as a catalyst.
  • The process included multiple steps such as Knoevenagel condensation, Michael addition, intramolecular cyclization, and dehydration.
  • Many of the new compounds showed significant antibacterial activity, particularly against Gram-positive bacteria and a notable multiresistant clinical isolate, indicating that combining embelin with different privileged substructures can enhance their antibacterial properties.
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It has been recently demonstrated that yeast cells are able to partially regress chromosome segregation in telophase as a response to DNA double-strand breaks (DSBs), likely to find a donor sequence for homology-directed repair (HDR). This regression challenges the traditional concept that establishes anaphase events as irreversible, hence opening a new field of research in cell biology. Here, the nature of this new behavior in yeast is summarized and the underlying mechanisms are speculated about.

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Article Synopsis
  • Topoisomerase II (Top2) is crucial for removing linkages between chromosomes, and its inhibition can cause mitotic catastrophe in cells, affecting their ability to divide.
  • Research on budding yeast showed that 75% of daughter cells resulting from Top2 inhibition become senescent, meaning they can't divide but are still alive.
  • The study also highlighted that the degree of senescence varies with ploidy levels, and that long-term survivors tend to develop significant genomic imbalances, like trisomies and loss of heterozygosity.
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DNA repair in late mitosis sets paradoxical scenarios. Cyclin-dependent kinase (CDK) activity is high, which favors homologous recombination (HR), despite a sister chromatid is not physically close to recombine with. We have found that DNA double-strand breaks partially revert chromosome segregation to find an intact template and repair through HR.

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Once thought a mere ribosome factory, the nucleolus has been viewed in recent years as an extremely sensitive gauge of diverse cellular stresses. Emerging concepts in nucleolar biology include the nucleolar stress response (NSR), whereby a series of cell insults have a special impact on the nucleolus. These insults include, among others, ultra-violet radiation (UV), nutrient deprivation, hypoxia and thermal stress.

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DNA double strand breaks (DSBs) pose a high risk for genome integrity. Cells repair DSBs through homologous recombination (HR) when a sister chromatid is available. HR is upregulated by the cycling dependent kinase (CDK) despite the paradox of telophase, where CDK is high but a sister chromatid is not nearby.

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Homologous recombination (HR) is a preferred mechanism to deal with DNA replication impairments. However, HR synapsis gives rise to joint molecules (JMs) between the nascent sister chromatids, challenging chromosome segregation in anaphase. Joint molecules are resolved by the actions of several structure-selective endonucleases (SSEs), helicases and topoisomerases.

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Article Synopsis
  • Naphthoquinones, derived from plants and microorganisms, exhibit strong biological activities by interacting with cell components, generating reactive oxygen species, and inhibiting proteins.
  • A study in the yeast Saccharomyces cerevisiae demonstrated that the toxicity of naphthoquinones lawsone and juglone is influenced by their chemical structure, with lawsone's effects heavily reliant on ROS production.
  • Some naphthoquinone derivatives disrupt mitochondrial function, with β-lapachone showing the highest potency, and the study also compared insights on their antibacterial and antitumor effects.
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