Publications by authors named "Fabiana Napolitano"

Background: Informative censoring affects interpretation of trials results. We investigated censoring rates in randomized controlled trials (RCTs) of immune checkpoint inhibitors (ICIs).

Methods: We searched articles of RCTs testing ICIs in advanced cancers, published up to 12/2023.

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Background: CDK4/6 inhibitors (CDK4/6i) are used for management of hormone receptor-positive (HR+) metastatic breast cancer (MBC), and activation of the RAS/MAPK and PI3K/AKT signalling pathways has been implicated in resistance to these agents. Pathogenic NF1 mutations (pNF1m) dysregulate RAS signalling, but NF1 has not been linked to CDK4/6i resistance. We analysed multi-institutional data, real-world evidence, and preclinical models to characterise the impact of pNF1m on CDK4/6i sensitivity.

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Multiple sclerosis (MS) is an autoimmune neurodegenerative disease resulting in myelin destruction and consequent physical disability. Several nutritional molecules modulate genes of reported relevance in MS eliciting beneficial effects. Intriguingly, some of these molecules are able to bind G-Quadruplexes (G4), specific DNA secondary structures involved in the regulation of gene expression and function.

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Respiratory syncytial virus (RSV) is a major cause of bronchiolitis and pneumonia, particularly in children, the elderly, and immunocompromised individuals. Despite significant health impacts, annual RSV-related hospitalizations may be underreported due to undertesting and limited diagnostic sensitivity. Point-of-care tests (POCTs) could enhance the rapid and accurate detection of RSV, enabling timely treatment and reducing hospitalizations.

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Background: Non-small cell lung cancer (NSCLC) is a significant global health challenge, with 2% of cases fuelled by RET rearrangements. RET inhibitors (RETi) have revolutionized treatment for these patients, but resistance remains an important clinical challenge limiting therapy effectiveness. This study investigated the mechanisms underlying resistance to RETi.

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FGFR1 amplification and FGFR1/2 activating mutations have been associated with antiestrogen resistance in estrogen receptor-positive (ER+) breast cancer. However, there are no approved FGFR1-targeted therapies for breast cancers harboring these alterations. In this study, we investigated the selective degradation of FGFR1/2 using the proteolysis-targeting chimera (PROTAC) DGY-09-192 as a novel therapeutic strategy in ER + breast cancers harboring FGFR1/2 somatic alterations.

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Purpose: Breast cancers with ESR1 mutations are resistant to antiestrogen therapy. In this study, we aimed to investigate the association of ESR1 mutations with resistance to CDK4/6 inhibitors (CDK4/6i) using real-world data analysis and experimental validation.

Experimental Design: A total of 3,958 patients with estrogen receptor-positive metastatic breast cancer with DNA sequencing data were analyzed.

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Purpose: Anti-programmed cell death 1 (PD1) is the first-choice treatment in patients with advanced cutaneous squamous cell carcinoma (cSCC), when curative options are unavailable. However, reliable biomarkers for patient selection are still lacking.

Experimental Design: In this translational study, clinical annotations, tissue and liquid biopsies were acquired to investigate the association between sustained objective responses and transcriptional profiles, immune cell dynamics in tumor tissue and peripheral blood samples, as well as circulating cytokine levels.

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Breast cancer, a leading cause of cancer-related mortality in women, is characterized by genomic instability and aberrant gene expression, often influenced by noncanonical nucleic acid structures such as G-quadruplexes (G4s). These structures, commonly found in the promoter regions and 5'-untranslated RNA sequences of several oncogenes, play crucial roles in regulating transcription and translation. Stabilizing these G4 structures offers a promising therapeutic strategy for targeting key oncogenic pathways.

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Background: Assessment of Progression-free survival (PFS) events by investigators might be inaccurate in randomized controlled trials (RCTs) with open-label design. We explored differences in PFS evaluated by blinded independent central review (BICR) or local investigator assessment (IA) in trials testing immunotherapy (IO) in advanced cancers.

Methods: We systematically reviewed articles of RCTs investigating IO in advanced tumors, published in PubMed-indexed journals up to December 2023.

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Article Synopsis
  • Luminal Androgen Receptor (LAR) triple-negative breast cancers (TNBC) show high PIK3CA mutation rates and express androgen receptors, leading researchers to explore the effects of combining CDK4/6 and PI3K signaling inhibitors.
  • The combination of palbociclib and capivasertib was found to significantly inhibit the growth of LAR TNBC cells, outperforming the palbociclib and alpelisib combination, while the AR antagonist enzalutamide showed no effectiveness.
  • The study indicates that the adaptive response to CDK4/6 inhibition involves PDGFRβ signaling, and suggests testing combined CDK4/6 and AKT inhibitors, as well as PD
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Cell-cell communication (CCC) is essential to how life forms and functions. However, accurate, high-throughput mapping of how expression of all genes in one cell affects expression of all genes in another cell is made possible only recently through the introduction of spatially resolved transcriptomics (SRT) technologies, especially those that achieve single-cell resolution. Nevertheless, substantial challenges remain to analyze such highly complex data properly.

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Malignant pleural mesothelioma (MPM) remains an incurable disease. This is partly due to the lack of experimental models that fully recapitulate the complexity and heterogeneity of MPM, a major challenge for therapeutic management of the disease. In addition, the contribution of the MPM microenvironment is relevant for the adaptive response to therapy.

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In patients with ER + metastatic breast cancer (mBC), the first-line treatment involves the combination of endocrine therapy (ET) and CDK4/6 inhibitors (CDK4/6i). However, a significant group of patients experiences disease progression, emphasizing the urgent clinical need to identify novel anti-tumor therapies. We previously generated breast cancer cells resistant to the combination of fulvestrant (ER downregulator) and abemaciclib (CDK4/6 inhibitor) from MCF7 and T47D (MCF7-FAR and T47D-FAR).

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CDK4/6 inhibitors (CDK4/6i) have improved survival of patients with estrogen receptor-positive (ER+) breast cancer. However, patients treated with CDK4/6i eventually develop drug resistance and progress. RB1 loss-of-function alterations confer resistance to CDK4/6i, but the optimal therapy for these patients is unclear.

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Background: As recommended in the European Society for Medical Oncology (ESMO) guidelines, assessment of health-related quality of life (HRQoL) should be a relevant endpoint in randomized controlled trials (RCTs) testing new anticancer therapies. However, previous publications by our group and others revealed a frequent underestimation and underreporting of HRQoL results in publication of RCTs in oncology. Herein, we systematically reviewed HRQoL reporting in RCTs testing new treatments in advanced prostate, kidney and urothelial cancers and published between 2010 and 2022.

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Article Synopsis
  • Cell-cell communication (CCC) is crucial for understanding how organisms function, and new spatially resolved transcriptomics technologies (SRTs) enable detailed mapping of gene interactions at the single-cell level, though data complexity remains a challenge.* -
  • The spacia framework utilizes a Bayesian multi-instance learning approach to detect CCCs, overcoming limitations of existing analytical tools by maintaining single-cell resolution and considering multiple senders and receivers.* -
  • Spacia's application across various single-cell SRT technologies revealed important insights into cellular behavior in cancer, such as the roles of different immune cells in prostate cancer and their correlation with patient outcomes.*
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Background: The identification of novel therapeutic strategies for metastatic colorectal cancer (mCRC) patients harbouring KRAS mutations represents an unmet clinical need. In this study, we aimed to clarify the role of p21-activated kinases (Paks) as therapeutic target for KRAS-mutated CRC.

Methods: Paks expression and activation levels were evaluated in a cohort of KRAS-WT or -mutated CRC patients by immunohistochemistry.

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Antibody-drug conjugates (ADCs) represent a novel and evolving class of antineoplastic agents, constituted by monoclonal antibody linked to biologically active drugs, delivering cytotoxic compounds at the tumor site, reducing the likelihood of systemic exposure and toxicity. They are generally well tolerated, nevertheless some predictable adverse reactions need careful monitoring and timely approach. These include neutropenia, nausea and vomiting, alopecia, diarrhea, left ventricular dysfunction, ILD/pneumonitis.

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CDK4/6 inhibitors (CDK4/6i) have improved survival of patients with estrogen receptor-positive (ER+) breast cancer. However, patients treated with CDK4/6i eventually develop drug resistance and progress. loss-of-function alterations confer acquired resistance to CDK4/6i, but the optimal therapy for these patients is unclear.

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Article Synopsis
  • - The study investigated the relationship between quality of life (QoL) and survival outcomes (progression-free survival (PFS) and overall survival (OS)) in phase III trials of new treatments for metastatic non-small cell lung cancer (NSCLC).
  • - Out of 81 reviewed randomized controlled trials, 37% showed improved QoL with experimental treatments, while QoL did not significantly differ in around 59% of trials. A significant correlation was observed between QoL and PFS, especially in studies testing targeted therapies.
  • - However, QoL did not significantly correlate with OS outcomes, indicating that while some new treatments may enhance QoL, they do not always lead to longer survival rates.
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Article Synopsis
  • - Neurodegenerative diseases are linked to the uncontrolled aggregation of amyloid proteins, prompting research into compounds that can modify these processes.
  • - Three metal complexes that release carbon monoxide (CORMs) were tested for their effects on the self-aggregation of a specific amyloidogenic protein fragment, the NPM1 peptide, showing varying impacts on fiber formation.
  • - Results indicated that while some complexes promote the formation of longer and stiffer amyloid fibers, one complex acted as an antiaggregating agent, suggesting that the choice of ligands in metal-based drugs could lead to potential therapies for amyloid-related diseases.
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Cyclin-dependent kinase 4 and 6 inhibitors (CDK4/6i) have been approved in combination with endocrine therapy (ET) to treat estrogen receptor-positive (ER+) metastatic breast cancer (BC). However, drug resistance represents the leading cause of breast cancer patients mortality. This study aimed to identify novel resistance mechanisms to ER antagonists in combination with CDK4/6 inhibitors.

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