Publications by authors named "Daniel Aibor Pyngrope"
Introduction: is an emerging food-borne pathogen with zoonotic potential which is often under-reported due to misidentifications.
Materials And Methods: The current study identified from retail fish sold in market which was confirmed by phenotypic (colorless colonies on Xylose-Rhamnose-Melibiose MacConkey Agar), genotypic (dual target uniplex PCR-based detection) and genomic methods (CheckM analysis). In this paper we report the phenotypic characters of the isolate and genomic features such as resistome, virulome and mobilome followed by O and H antigen based typing and comparative phylogenomics using various tools (RAST, RGI v6.
of porcine origin exhibits an open pan-genome within a single clonal complex: insights from comparative genomic analysis.
Front Cell Infect Microbiol
October 2024
Article Synopsis
- This study focuses on the genomics of zoonotic foodborne pathogens originating from pigs, highlighting the limited knowledge in this area.
- Researchers analyzed pig-derived genomes alongside existing data to explore their genetic features, virulence, resistance, and phylogenomic relationships.
- Findings show that most pig isolates belong to a specific clonal complex, with a significant presence of antibiotic resistance genes and a diverse set of mobile genetic elements, indicating potential public health implications.
Avian strains of emerging pathogen are phylogenetically diverse and harbor the greatest AMR dissemination potential among different sources: Comparative genomic evidence.
Front Microbiol
January 2023
Introduction: is regarded as an emerging pathogen with zoonotic potential. In the current study, we undertook source-wise comparative genomic analyses (resistome, virulome, mobilome and pangenome) to understand the antimicrobial resistance, virulence, mobile genetic elements and phylogenetic diversity of .
Methods: Six strains (5 multidrug resistant strains and 1 biofilm former) were isolated from poultry (duck faeces and retail chicken samples).