Publications by authors named "Akhil Velluva"

Pathogenic variants in , a gene encoding for an autophagy adaptor termed ALFY, are linked to neurodevelopmental delay and altered brain size in human probands. While the role of loss-of-function is extensively studied in neurons, little is known about the effects of upregulation in different cell types of the central nervous system (CNS). We show that overexpression of the ortholog, , in either glia or neurons impaired autophagy and locomotion.

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Obesity is one of the diseases with severe health consequences and rapidly increasing worldwide prevalence. Understanding the complex network of food intake and energy balance regulation is an essential prerequisite for pharmacological intervention with obesity. G protein-coupled receptors (GPCRs) are among the main modulators of metabolism and energy balance.

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Article Synopsis
  • Vaspin is a protein linked to obesity that may influence metabolism, but its exact role is still unclear; researchers aimed to understand its genetic variability and impact on metabolic traits.
  • A meta-analysis of data from 6 studies involving nearly 7,450 people identified significant genetic variants associated with vaspin levels and conducted further analyses to explore its causal relationship with lipid traits.
  • Results indicated that vaspin levels are genetically determined and have a causal effect on lipid metabolism, as evidenced by changes in triglyceride levels in treated mice.
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Previous studies suggested that severe epilepsies, e.g., developmental and epileptic encephalopathies (DEEs), are mainly caused by ultra-rare de novo genetic variants.

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Previous studies suggested that severe epilepsies e.g., developmental and epileptic encephalopathies (DEE) are mainly caused by ultra-rare genetic variants.

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Article Synopsis
  • Phospholipid scramblase 4 (PLSCR4) is important for redistributing phospholipids in cell membranes and regulating cell signaling, but its specific function in adipose tissue remains unclear amid the roles of PLSCR1 and PLSCR3.* -
  • PLSCR4 is downregulated in adipose-progenitor cells lacking the tumor suppressor PTEN, which is linked to abnormal fat growth and lipoma development in patients.* -
  • Research shows that decreased PLSCR4 leads to increased lipid accumulation and activation of the PI3K/AKT signaling pathway, suggesting that PLSCR4 might help manage fat cell growth and be relevant in conditions associated with PTEN loss
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The 15q13.3 microdeletion has pleiotropic effects ranging from apparently healthy to severely affected individuals. The underlying basis of the variable phenotype remains elusive.

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Steller's sea cow, an extinct sirenian and one of the largest Quaternary mammals, was described by Georg Steller in 1741 and eradicated by humans within 27 years. Here, we complement Steller's descriptions with paleogenomic data from 12 individuals. We identified convergent evolution between Steller's sea cow and cetaceans but not extant sirenians, suggesting a role of several genes in adaptation to cold aquatic (or marine) environments.

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The precise and rapid construction of alleles through CRISPR/Cas9-mediated genome engineering renders a powerful animal system for molecular structure-function analyses and human disease models. Application of the co-selection method offers expedited generation and enrichment of scarlessly edited alleles without the need for linked transformation markers, which specifically in the case of exon editing can impact allele usability. However, we found that knockin procedures by homology-directed repair (HDR) under co-selection resulted in low transformation efficiency.

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Background: RNA-seq emerges as a valuable method for clinical genetics. The transcriptome is "dynamic" and tissue-specific, but typically the probed tissues to analyze (TA) are different from the tissue of interest (TI) based on pathophysiology.

Results: We developed Phenotype-Tissue Expression and Exploration (PTEE), a tool to facilitate the decision about the most suitable TA for RNA-seq.

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Background: Elucidation of lipid metabolism and accumulation mechanisms is of paramount importance to understanding obesity and unveiling therapeutic targets. In vitro cell models have been extensively used for these purposes, yet, they do not entirely reflect the in vivo setup. Conventional lipomas, characterized by the presence of mature adipocytes and increased adipogenesis, could overcome the drawbacks of cell cultures.

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