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This study aimed to molecularly characterize Proteus vulgaris, assess its antibiotic susceptibility and profile virulence genes in isolates from cattle showing clinical signs of bovine respiratory disease (BRD) in Bangladesh. A total of 61 samples, including nasal swabs and lung tissues, were collected from cattle of varying ages and sexes between January and June 2024. Samples were cultured in sterile nutrient broth and streaked onto nutrient agar, blood agar, and MacConkey agar. Identification was performed through Gram staining, biochemical assays and molecular techniques, including PCR and partial gene sequencing. Antibiotic susceptibility was evaluated using the disc diffusion method, and virulence genes were detected by PCR. The isolates exhibited swarming motility and hemolytic, greyish colonies on blood agar; small, circular, pale-to-yellow colonies with a fishy odour on MacConkey agar; and appeared as small, pink-stained coccobacilli (singly or in pairs) under Gram staining. Biochemical testing showed positive reactions for catalase, methyl red, indole and Voges-Proskauer tests, and negative results for lactose fermentation and oxidase. PCR confirmed P. vulgaris in 11 samples (18%). Partial sequencing and phylogenetic analysis revealed 100% identity with strains reported in Germany and the USA. All isolates were sensitive to ceftriaxone and levofloxacin but showed complete resistance to penicillin, erythromycin, ampicillin and tetracycline. PCR analysis also identified the presence of the virulence genes luxS and rsbA. This is the first report of P. vulgaris associated with respiratory infections in cattle in Bangladesh.
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http://dx.doi.org/10.1002/vms3.70561 | DOI Listing |
Eur J Clin Microbiol Infect Dis
September 2025
School of Bioengineering and Biosciences, Department of Biochemistry, Lovely Professional University, Punjab, 144411, India.
Purpose: This study investigates codon usage and amino acid usage bias in the genus Acinetobacter to uncover the evolutionary forces shaping these patterns and their implications for pathogenicity and biotechnology.
Methods: Codon usage patterns were examined in representative genomes of the genus Acinetobacter using standard codon bias indices, including GC content, relative synonymous codon usage (RSCU), effective number of codons (ENC), and codon adaptation index (CAI). Neutrality and parity plots were employed to evaluate the relative influence of mutational pressure and natural selection on codon preferences.
J Appl Microbiol
September 2025
Laboratory of Food Microbiology and Hygiene, Graduate School of Integrated Sciences for Life, Hiroshima University, 1-4-4 Kagamiyama, Higashihiroshima 739-8528, Japan.
Aims: This study aims to investigate the genomic profile of a multidrug-resistant Escherichia coli strain, 160-11H1, co-carrying an extended-spectrum β-lactamase (ESBL) and the plasmid-mediated mobile colistin resistance gene, mcr-5.
Methods And Results: The entire genome of the strain was sequenced using Illumina MiSeq and Oxford Nanopore platforms, and de novo assembly was performed using Unicycler. The genome size was 5 031,330 bp and comprised 5 140 coding sequences.
Microbiol Spectr
September 2025
United States Department of Agriculture, Agricultural Research Service (USDA-ARS), Southeast Poultry Research Laboratories, US National Poultry Research Center, Athens, Georgia, USA.
Infectious bursal disease (IBD), a highly contagious viral disease in young chickens, poses significant economic losses due to high mortality and immunosuppression. While IBD virus (IBDV) virulence is influenced by multiple genes, whole-genome sequencing (WGS) of IBDV is crucial for defining the strain pathotype and clinical profile. Flinders Technology Associates (FTA) cards are convenient for field sample collection, but their filter paper matrix can hinder nucleic acid recovery, impacting sequencing efficiency.
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September 2025
International Centre for Diarrheal Disease Research, Bangladesh (icddr,b), Dhaka, Bangladesh.
Enterotoxigenic (ETEC), a leading cause of diarrhea, is defined by heat-stable (ST) and/or heat-labile (LT) toxins and associated colonization factors (CFs). However, there is still a knowledge gap in understanding ETEC's evolution, particularly in endemic regions like Bangladesh. This study investigates the genomic attributes contributing to the rise of ETEC-associated diarrhea in Bangladesh during 2022-2023.
View Article and Find Full Text PDFmBio
September 2025
Department of Microbiology, Oregon State University, Corvallis, Oregon, USA.
Quorum sensing (QS) is a widespread signaling mechanism in bacteria that coordinates collective behaviors according to population density. A foundational assumption in this field is that QS functions as a gene expression switch that synchronizes responses at the population level. While some studies indeed report homogeneous on/off transitions, others report heterogeneity at the cellular level, challenging the canonical view.
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