Genome-Wide Identification of Gene Family in Daylily ( Baroni) and Its Expression Profiles in Development, Hormone and Biotic Stress Response.

Biology (Basel)

Engineering Research Center of Coal-Based Ecological Carbon Sequestration Technology of the Ministry of Education, Shanxi Datong University, Datong 037009, China.

Published: June 2025


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

The family of transcription factors plays an essential role in the regulation of plant development, the transmission of hormonal signals, and the adaptation to environmental stresses seen in numerous species. However, a comprehensive analysis of the family of (daylily) is lacking, despite its potential to help understand the stress content and developmental processes of the monospecies. This study identified genes () in , which were classified into 15 subfamilies based on chromosomal location, gene structure, conserved motifs, and expression patterns. An analysis of promoter regions indicated a significant presence of elements related to hormones and stress, showcasing these genes' role in adapting to environmental pressures. The GO and KEGG analyses indicated that genes were engaged in pathways associated with developmental processes and responses to environmental stress. Notably, was identified as a key interacting protein for SHR, SCR, and DELLA subfamily members, which suggested its central role in coordinating stress response and developmental signaling. Comparative genomic mapping with seven representative monocot and dicot species underscored evolutionary conservation and divergence in functions of the family. The expression profiling of 22 genes across different daylily tissues provided insights into their tissue-specific roles. This research may promote the further exploration of the functional characteristics of genes.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC12292224PMC
http://dx.doi.org/10.3390/biology14070770DOI Listing

Publication Analysis

Top Keywords

family daylily
8
stress response
8
developmental processes
8
stress
5
genome-wide identification
4
identification gene
4
family
4
gene family
4
daylily baroni
4
baroni expression
4

Similar Publications

Genome-Wide Identification of Gene Family in Daylily ( Baroni) and Its Expression Profiles in Development, Hormone and Biotic Stress Response.

Biology (Basel)

June 2025

Engineering Research Center of Coal-Based Ecological Carbon Sequestration Technology of the Ministry of Education, Shanxi Datong University, Datong 037009, China.

The family of transcription factors plays an essential role in the regulation of plant development, the transmission of hormonal signals, and the adaptation to environmental stresses seen in numerous species. However, a comprehensive analysis of the family of (daylily) is lacking, despite its potential to help understand the stress content and developmental processes of the monospecies. This study identified genes () in , which were classified into 15 subfamilies based on chromosomal location, gene structure, conserved motifs, and expression patterns.

View Article and Find Full Text PDF

Drought stress is a significant environmental factor that can impede plant growth and ornamental quality. , a drought-tolerant garden plant, has attracted attention for its ornamental value and application prospects. To investigate the molecular mechanism of drought stress resistance of .

View Article and Find Full Text PDF

Genome-wide identification of the NAC family in and functional analysis of in response to abiotic stress in watermelon.

Front Plant Sci

October 2024

Shanxi Key Laboratory of Germplasm Resources Innovation and Utilization of Vegetable and Flower, College of Horticulture, Shanxi Agricultural University, Taigu, China.

Article Synopsis
  • The NAC (NAM, ATAF, and CUC) transcription factor family plays a crucial role in plant growth, development, and stress resistance, yet the gene family in night lily has not been systematically analyzed before.
  • A genome-wide study identified 113 HcNAC gene members from the Hemerocallis citrina genome, revealing their uneven distribution across 11 chromosomes and categorizing them into 16 subgroups based on phylogenetic analysis.
  • The study also indicated that most HcNAC genes have higher expression in roots and that certain genes respond differently to drought and salinity, suggesting their significant role in abiotic stress response and potential for improving stress resilience in transgenic plants.
View Article and Find Full Text PDF
Article Synopsis
  • Sucrose invertase is a crucial enzyme in plants that breaks down sucrose into fructose and glucose, and its role in daylily flower aging needs further exploration.
  • Researchers used bioinformatics to analyze the daylily genome, identifying 35 sucrose invertase genes and classifying them into three subfamilies: cell wall, vacuolar, and chloroplast invertases.
  • The study established the basic properties and expression patterns of these genes, revealing nearly all invertases show some level of expression during different developmental stages of the daylily flowers.
View Article and Find Full Text PDF

Baroni (. ) is an important specialty vegetable that is not only edible and medicinal but also has ornamental value. However, much remains unknown about the regulatory mechanisms associated with the growth, development, and flowering rhythm of this plant.

View Article and Find Full Text PDF