98%
921
2 minutes
20
Background: We aimed to evaluate and compare the applicability of Logical Observation Identifiers Names and Codes (LOINC) and SNOMED CT in mapping frequently requested panel tests.
Method: Frequently requested panel tests were identified from the test records of two major referral laboratories. Subsequently, LOINC and SNOMED CT mappings were cross-validated, and the results were classified based on pre-defined criteria. A consensus was reached among the teams. A comparative structural analysis was performed by aligning the mapped SNOMED CT concepts with LOINC codes and visualizing the selected items with conditionality to evaluate the differences in representation.
Results: We conducted 23 panel tests. Exact mapping was achieved for 87.0% of the panel tests using LOINC: two failures were recorded due to the lack of a suitable code, and one panel test was classified as narrowly mapped. In contrast, SNOMED CT achieved the exact mapping for 78.2% of the panel tests, with 12 mappings requiring post-coordination to represent the test concepts. SNOMED CT mapping failures stemmed from missing primitive concepts and limited pre-coordinated codes. LOINC offered detailed component specifications and predefined panel codes. In contrast, SNOMED CT relied on post-coordination to address gaps in the pre-defined codes, allowing the addition of new combinations where necessary.
Conclusion: LOINC demonstrated advantages in mapping frequently performed panel tests with higher exact mapping rates and structured panel codes. However, leveraging SNOMED CT's flexibility through initiatives such as the LOINC Ontology project could enhance interoperability and standardization in laboratory data exchange.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1016/j.ijmedinf.2025.106055 | DOI Listing |
Appl Environ Microbiol
September 2025
Department of Biology, University of Regina, Regina, Saskatchewan, Canada.
Unlabelled: Bovine respiratory disease (BRD) is the primary disease of cattle and is responsible for most of the antibiotic use in the beef industry, both for metaphylaxis and treatment. Infection prevention and targeted treatments would benefit from detecting and identifying bacterial pathogens and, ideally, assessing antibiotic sensitivity. Here, we report success refining targeted metagenomics by hybridization capture sequencing (CapSeq) to detect and genotype bacterial pathogens and genes for antibiotic resistance in BRD.
View Article and Find Full Text PDFSleep
September 2025
Center for Sleep Medicine, Hospices Civils de Lyon, Lyon 1 University, Lyon, F-69000, France.
Current treatments for narcolepsy type 1 (NT1) have little impact on psychiatric, cognitive and metabolic comorbidities. Here, we evaluated the feasibility, safety and efficacy of a prospective Exercise Training (ET) program on sleep-related symptoms and comorbidities in NT1. Sedentary adult with NT1 participated in a 6-week supervised ET program followed by a 18-week self-directed program.
View Article and Find Full Text PDFJ Histotechnol
September 2025
Department of Pathology, Peking University Third Hospital, Beijing, China.
Amyloidosis encompasses a spectrum of rare disorders characterized by extracellular amyloid deposition. Achieving an accurate early diagnosis of systemic amyloidosis necessitates biopsy-specific pathological evaluation. Formalin-fixed, paraffin-embedded liver biopsy specimens were examined using Congo red staining, electron microscopy, immunohistochemistry (IHC), immunofluorescence, and Congo red-assisted laser microdissection with mass spectrometry (LMD/MS).
View Article and Find Full Text PDFEur J Case Rep Intern Med
August 2025
Department of Internal Medicine, Local Health Unit of São João, Porto, Portugal.
Unlabelled: Bariatric surgery has emerged as a highly effective treatment option for individuals with obesity. Severe hypoalbuminaemia is a feared complication after a Roux-en-Y gastric bypass. It is characterised by a low serum albumin level of <25 g/l, neither explained by renal losses, protein-losing enteropathy nor by liver disfunction, and is associated with high morbidity and mortality.
View Article and Find Full Text PDFCongenital disorders of glycosylation (CDG) are a heterogeneous group of inherited metabolic diseases (IMD) characterized by defects in the synthesis and modification of glycoproteins and glycolipids. One of these disorders is ATP6AP1-CDG, a rare X-linked disease with approximately 30 cases reported so far. Symptoms associated with ATP6AP1-CDG include immunodeficiency, liver dysfunction, and neurological manifestations.
View Article and Find Full Text PDF