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Environmental DNA (eDNA) has transformed biodiversity monitoring, especially in aquatic environments; yet, its application in terrestrial habitats remains limited. In arid regions, artificial waterbodies, such as farm dams and water troughs, serve as essential resources for wildlife and offer a promising but underutilised opportunity for eDNA-based detection. Here, we designed and validated a highly sensitive, species-specific quantitative PCR (qPCR) assay to detect the nationally threatened southern squatter pigeon (). We validated the qPCR assay in the field by successfully detecting the target species at extremely low DNA concentrations (1 × 10 ng/μL; = 0.992) using both active syringe and passive filtration methods across multiple farm dams and water troughs on a 20,000-ha cattle property in northern Australia. To complement eDNA analysis, we also undertook standardised 20-min, 2-ha bird surveys at these sites. Positive detections were recorded at both trough and dam sites during the austral tropical dry season. Notably, whilst eDNA detections and visual bird counts aligned in terms of the number of occupied sites, their exact locations did not always coincide, highlighting the complementary nature of these two monitoring techniques. This assay represents a significant advancement in the conservation of this threatened ground-nesting species, demonstrating that eDNA sampling at artificial waterpoints is a viable tool for monitoring terrestrial fauna in remote, semi-arid landscapes.
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http://dx.doi.org/10.1002/ece3.71509 | DOI Listing |
Ecol Evol
August 2025
Fukui City Museum of Natural History Fukui Japan.
Agricultural intensification and land reclamation have transformed natural wetlands into farmland across East Asia, which has been a threat to bird diversity, particularly wetland and grassland specialists. Despite extensive research in warm temperate and tropical rice-growing regions, bird communities in snow-rich agricultural wetland landscapes remain poorly studied. Here we present a dataset describing bird assemblages in a heterogeneous agricultural landscape surrounding Lake Kahokugata, located in a snow-rich region on the Sea of Japan side of central Japan.
View Article and Find Full Text PDFEcotoxicol Environ Saf
August 2025
Aquatic Ecology and Water Quality Management group, Wageningen University & Research, Wageningen, the Netherlands; Wageningen Environmental Research, Wageningen University & Research, Wageningen, the Netherlands.
Triclosan is a widely used antimicrobial agent frequently detected in aquatic environments. Although its effects on environmental microorganisms have been extensively studied, findings often remain inconsistent due to variations in experimental setups and sediment characteristics. Comparative studies that assess microbial responses across different sediment types, however, are still scarce.
View Article and Find Full Text PDFEcol Evol
June 2025
Centre for Conservation Ecology and Genomics, Institute for Applied Ecology University of Canberra Bruce Australian Capital Territory Australia.
Environmental DNA (eDNA) has transformed biodiversity monitoring, especially in aquatic environments; yet, its application in terrestrial habitats remains limited. In arid regions, artificial waterbodies, such as farm dams and water troughs, serve as essential resources for wildlife and offer a promising but underutilised opportunity for eDNA-based detection. Here, we designed and validated a highly sensitive, species-specific quantitative PCR (qPCR) assay to detect the nationally threatened southern squatter pigeon ().
View Article and Find Full Text PDFFront Artif Intell
May 2025
School of Earth Systems and Sustainability, Southern Illinois University, Carbondale, IL, United States.
High-resolution digital elevation models (HRDEMs) from LiDAR and InSAR technologies have significantly improved the accuracies of mapping hydrographic features such as river boundaries, streamlines, and waterbodies over large areas. However, drainage crossings that facilitate the passage of drainage flows beneath roads are not often represented in HRDEMs, resulting in erratic or distorted hydrographic features. At present, drainage crossing datasets are largely missing or available with variable quality.
View Article and Find Full Text PDFEnviron Monit Assess
May 2025
Regional Remote Sensing Centre - East, NRSC, ISRO, Kolkata, India.
Remote sensing (RS) data is extensively used in the observation and management of surface water and the detection of water bodies for studying ecological and hydrological processes. Small waterbodies are often neglected because of their tiny presence in the image, but being very large in numbers, they significantly impact the ecosystem. However, the detection of small waterbodies in satellite images is challenging because of their varying sizes and tones.
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