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Environmental stress can exacerbate inbreeding depression by amplifying differences between inbred and outbred individuals. In wild populations, where the environment is often unpredictable and stress can be highly detrimental, the interplay between inbreeding depression and environmental variation is potentially important. Here, we investigate variation in inbreeding level, fitness and strength of inbreeding depression across a fine-scale geographic area (~12 km) in an individually monitored population of red deer (). We show that northern regions of the study area have lower birth weights, lower juvenile survival rates, and higher inbreeding coefficients. Such fine-scale differences in inbreeding coefficients could be caused by the mating system of red deer combined with female density variation. We then tested for an inbreeding depression-by-environment interaction (ID × E) in birth weight and juvenile survival, by fitting an interaction term between the inbreeding coefficient and geographic location. We find that inbreeding depression in juvenile survival is stronger in the harsher northern regions, indicating the presence of ID × E. We also highlight that the ability to infer ID E is affected by the variation in inbreeding within each geographic region. Therefore, for future studies on ID E in wild populations, we recommend first assessing whether inbreeding and traits vary spatially or temporally. Overall, this is one of only a handful of studies to find evidence for ID E in a wild population-despite its prevalence in experimental systems-likely due to intense data demands or insufficient variation in environmental stress or inbreeding coefficients.
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http://dx.doi.org/10.1093/evlett/qrae073 | DOI Listing |
Anim Biosci
September 2025
Graduate school of environmental, life and natural science, Okayama University, Okayama, Japan.
Objectives: The objective of this study was to evaluate genomic inbreeding in Japanese Black cattle and its effects on reproductive traits.
Methods: The study analyzed reproductive records and SNP data from Japanese Black cattle born between 2001 and 2005, resulting in 8,553 records from large farms. Genomic inbreeding was assessed using SNP data from 782 animals.
J Anim Ecol
September 2025
Centre for Ecology, Evolution, and Conservation, School of Biological Sciences, University of East Anglia, Norwich, UK.
Inbreeding and the associated increase in homozygosity and potential accumulation of deleterious alleles may reduce fitness in a process known as inbreeding depression. Mechanisms to mitigate reproduction between close relatives, ranging from pre-mating mate choice to post-mating gamete selection, have evolved across taxa. In external fertilisers like Atlantic salmon (Salmo salar), where females have limited control over paternity, mechanisms of inbreeding avoidance can be expected to evolve at the gamete level.
View Article and Find Full Text PDFG3 (Bethesda)
August 2025
Department of Biology and Center for Genomics & Systems Biology, New York University, New York, New York 10012, USA.
Outbreeding populations harbor large numbers of recessive deleterious alleles that reduce the fitness of inbred individuals, and this inbreeding depression potentially shapes the evolution of mating systems, acting as a counterweight to the inherent selective advantage of self-fertilization. The population biological factors that influence inbreeding depression are numerous and often difficult to disentangle. We investigated the utility of obligately-outcrossing Caenorhabditis nematodes as models for inbreeding depression.
View Article and Find Full Text PDFBMC Plant Biol
August 2025
Department of Agronomy and Plant Breeding, College of Agriculture, Isfahan University of Technology, Isfahan, 84156-83111, Iran.
Background: As climate change intensifies, perennial plants face more frequent drought periods throughout their lifespan. Drought stress memory in certain plants significantly enhances their adaptability to challenging environmental circumstances. However, in open-pollinated crops, this process is influenced by population plasticity due to the type and degree of genetic diversity, and inbreeding depression.
View Article and Find Full Text PDFPLoS Pathog
August 2025
Disease Intervention and Prevention Program, Texas Biomedical Research Institute, San Antonio, Texas, United States of America.
Schistosomes are obligately sexual blood flukes that can be maintained in the laboratory using freshwater snails as intermediate and rodents as definitive hosts. The genetic composition of laboratory schistosome populations is poorly understood: whether genetic variation has been purged due to serial inbreeding or retained is unclear. We sequenced 19 - 24 parasites from each of five laboratory Schistosoma mansoni populations and compared their genomes with published exome data from four S.
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