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Heparin is a widely used drug to treat thrombotic disorders in hospitals. Heparosan synthase 2 from (PmHS2) is a key enzyme used for the chemoenzymatic synthesis of heparin oligosaccharides. It has both activities: glucosaminyl transferase activity and glucuronyl transferase activity; however, the mechanism to carry out the glyco-oligomerization is unknown. Here, we report crystal structures of PmHS2 constructs with bound uridine diphosphate (UDP) and a cryo-EM structure of PmHS2 in complex with UDP and a heptasaccharide (NS 7-mer) substrate. Using a LC-MC analytical method, we discovered the enzyme displays both a two-step concerted oligomerization mode and a distributive oligomerization mode depending on the non-reducing end of the starting oligosaccharide primer. Removal of 7 amino acid residues from the C-terminus results in an enzymatically active monomer instead of dimer and loses the concerted oligomerization mode of activity. In addition, the monomer construct can transfer N-acetyl glucosamine at a substrate concentration that is ∼7-fold higher than wildtype enzyme. It was also determined that an F529A mutant can transfer an N-sulfo glucosamine (GlcNS) saccharide from a previously inactive UDP-GlcNS donor. Performing the glyco-transfer reaction at a high substrate concentration and the capability of using unnatural donors are desirable to simplify the chemoenzymatic synthesis to prepare heparin-based therapeutics.
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http://dx.doi.org/10.1021/acscatal.4c00677 | DOI Listing |
MedComm (2020)
September 2025
The activation of nucleotide oligomerization domain-like receptor (NLR) family, pyrin domain-containing protein 3 (NLRP3) inflammasome is implicated in the pathogenesis of various inflammatory diseases. The natural product oridonin possesses a novel mechanism for NLRP3 inhibition and a unique binding mode with NLRP3, but its poor anti-inflammatory activity limits further application. After virtual screening of diverse natural product libraries, dehydrocostus lactone (DCL) was considered as a potential NLRP3 inhibitor.
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Shenzhen Key Laboratory for Nano-Biosensing Technology, School of Biomedical Engineering, Shenzhen University Medical School, Shenzhen University, Shenzhen 518060, China.
Self-assembly is regarded as a facile method to fabricate luminescent nanomaterials with aggregation induced emission (AIE) properties for optical sensor design. In this work, a pH-controlled self-ratiometric sensing platform utilizing aggregation-induced emission (AIE)-active Au(I)-TCEP-Cd(II) nanoaggregates was developed for highly reliable D-penicillamine (DPA) detection. Through stoichiometric coordination with Cd, oligomeric Au(I)-tris(2-carboxyethyl)phosphine (TCEP) complexes could self-assemble into snowflake-like nanoaggregates (∼100 nm) with strong yellow emission (540 nm) and excellent aqueous stability.
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August 2025
Structural and Molecular Microbiology, Vlaams Instituut voor Biotechnology (VIB) Center for Structural Biology, Brussels 1050, Belgium.
The polar-growing have a complex cell envelope architecture characterized by the presence of a specialized outer membrane composed of mycolic acids. In some , this mycomembrane is further supported by a proteinaceous surface layer or "S-layer," whose function, structure, and mode of assembly remain largely enigmatic. Here, we isolated ex vivo PS2 S-layers from the industrially important and determined its atomic structure by 3D cryo-EM reconstruction.
View Article and Find Full Text PDFNat Commun
July 2025
Max Planck Institute of Biochemistry, Planegg, Germany.
Monoclonal antibodies (mAb) are key therapeutic agents in cancer immunotherapy and exert their effects through Fc receptor-dependent and -independent mechanisms. However, the nanoscale receptor reorganization resulting from mAb binding and its implications for the therapeutic mode of action remain poorly understood. Here, we present a multi-target 3D RESI super-resolution microscopy technique that directly visualizes the structural organization of CD20 receptors and the Type I (e.
View Article and Find Full Text PDFNat Commun
July 2025
Université Paris Cité, Inserm, CEA, Stabilité Génétique Cellules Souches et Radiations, LRGM/iRCM/IBFJ, F-92260, Fontenay-aux-Roses, France.
Homologous recombination (HR) is essential for the repair of DNA double-strand breaks and the restart of stalled replication forks. A critical step in HR is the formation of Rad51 nucleofilaments, which perform homology search and strand invasion of a homologous DNA sequence required for repair synthesis. In the yeast Saccharomyces cerevisiae, Rad52 facilitates Rad51 nucleofilament formation by mediating Rad51 loading onto ssDNA and counteracting Rad51 filament dissociation by the DNA translocase Srs2.
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