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Unlabelled: infections (CDI) cause almost 300,000 hospitalizations per year of which ~15-30% are the result of recurring infections. The prevalence and persistence of CDI in hospital settings has resulted in an extensive collection of clinical isolates and their classification, typically by ribotype. While much of the current literature focuses on one or two prominent ribotypes (., RT027), recent years have seen several other ribotypes dominate the clinical landscape (, RT106 and RT078). Some ribotypes are associated with severe disease and / or increased recurrence rates, but why are certain ribotypes more prominent or harmful than others remains unknown. Because has a large, open pan-genome, this observed relationship between ribotype and clinical outcome could be a result of the genetic diversity of . Thus, we hypothesize that core biological processes of are conserved across ribotypes / clades. We tested this hypothesis by observing the growth kinetics, sporulation, germination, bile acid sensitivity, bile salt hydrolase activity, and surface motility of fifteen strains belonging to various ribotypes spanning each known clade. In viewing these phenotypes across each strain, we see that core phenotypes (growth, germination, sporulation, and resistance to bile salt toxicity) are remarkably consistent across clades / ribotypes. This suggests that variations observed in the clinical setting may be due to unidentified factors in the accessory genome or due to unknown host-factors.
Importance: infections impact thousands of individuals every year many of whom experience recurring infections. Clinical studies have reported an unexplained correlation between some clades / ribotypes of and disease severity / recurrence. Here, we demonstrate that strains across the major clades / ribotypes are consistent in their core phenotypes. This suggests that such phenotypes are not responsible for variations in disease severity / recurrence and are ideal targets for the development of therapeutics meant to treat related infections.
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http://dx.doi.org/10.1101/2025.01.10.632434 | DOI Listing |
J Phycol
August 2025
Observatoire Régional de la Recherche Environnementale et Climatique, Centre d'Etude et de Recherche de Djibouti, Djibouti, Republic of Djibouti.
This study provides a comprehensive investigation of Gonyaulax hyalina, integrating morphological, phylogenetic, and toxicological approaches. Strains were re-isolated from its type locality in the Gulf of Aden (western Indian Ocean) 124 years after its original description by Ostenfeld and Schmidt (1901, p. 141), along with additional Pacific strains collected from Korea and Viet Nam.
View Article and Find Full Text PDFAnaerobe
August 2025
National Laboratory of Health, Environment and Food, Maribor, Slovenia; Faculty of Medicine, University of Maribor, Maribor, Slovenia. Electronic address:
Objective: We aimed to investigate the prevalence, genotypic diversity, and clonality of Clostridioides difficile strains from household composters and faeces of small mammals captured nearby.
Methods: Compost piles from three locations were sampled, with three compost samples collected from each bin. Additionally, 5-6 small mammals were trapped around each compost pile.
BMC Microbiol
July 2025
Institut Für Medizinische Mikrobiologie Und Virologie, Universitätsmedizin Göttingen, Göttingen, Germany.
Background And Objectives: Rifaximin (RFX) has recently been suggested as an alternative treatment option for Clostridioides difficile infection. This study reports the survey on RFX susceptibility within a C. difficile test cohort that represents the five clinically relevant phylogenetic clades.
View Article and Find Full Text PDFAppl Environ Microbiol
July 2025
Department of Biology, Texas A&M University, College Station, Texas, USA.
infections (CDI) cause almost 300,000 hospitalizations per year, of which ~15%-30% are the result of recurring infections. The prevalence and persistence of CDI in hospital settings have resulted in an extensive collection of clinical isolates and their classification, typically by ribotype. While much of the current literature focuses on one or two prominent epidemic ribotypes (e.
View Article and Find Full Text PDFOpen Life Sci
May 2025
Key Laboratory of Endemic and Ethnic Diseases, Ministry of Education & School/Hospital of Stomatology & Key Laboratory of Microbiology and Parasitology of Education Department of Guizhou, Guizhou Medical University, Guiyang, Guizhou, 550025, China.
is a pathogen that causes pseudomembranous colitis with antibiotic-associated diarrhea. The epidemiology and molecular evolution of may differ among different geographic regions, and mining its genomic information can help to understand the epidemiology and molecular evolution of and focus on its transmission mode. A strain denoted WXL8 was isolated from a human fecal sample from a patient in the intensive care unit, and its physiology and genomic sequence were determined.
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