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Nucleotide excision repair (NER) is crucial for repairing bulky lesions and crosslinks in DNA caused by exogenous and endogenous genotoxins. The number of studies that have considered DNA repair as a biomarker is limited, and therefore one of the primary objectives of the European COST Action hCOMET (CA15132) was to assemble and analyse a pooled database of studies with data on NER activity. The database comprised 738 individuals, gathered from 5 laboratories that ran population studies using the comet-based in vitro DNA repair assay. NER activity data in peripheral blood mononuclear cells were normalized and correlated with various host-related factors, including sex, age, body mass index (BMI), and smoking habits. This multifaceted analysis uncovered significantly higher NER activity in female participants compared to males (1.08 ± 0.74 vs. 0.92 ± 0.71; P = .002). Higher NER activity was seen in older subjects (>30 years), and the effect of age was most pronounced in the oldest females, particularly those over 70 years (P = .001). Females with a normal BMI (<25 kg/m2) exhibited the highest levels of NER, whereas the lowest NER was observed in overweight males (BMI ≥ 25 kg/m2). No independent effect of smoking was found. After stratification by sex and BMI, higher NER was observed in smoking males (P = .017). The biological implication of higher or lower repair capacity remains unclear; the inclusion of DNA repair as a biomarker in molecular epidemiological trials should elucidate the link between health and disease status.
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http://dx.doi.org/10.1093/mutage/geae028 | DOI Listing |
Probiotics Antimicrob Proteins
September 2025
Department of Biosciences and Bioengineering, Indian Institute of Technology Roorkee, Roorkee, Uttarakhand, 247 667, India.
Ethnic fermented foods represent a significant repository for discovering novel probiotic entities. These fermented foods, entrenched in indigenous practices, have conserved a distinct microbiota through generations. Exploration of these fermented foods could yield microbial consortia capable of transforming human health.
View Article and Find Full Text PDFInt J Biol Macromol
September 2025
Biochemistry and Structural Biology Division, CSIR-Central Drug Research Institute, Lucknow, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, 201002, India. Electronic address:
The nucleotide excision repair (NER) pathway in Mycobacterium tuberculosis (Mtb) is important for DNA damage repair and bacterial survival under stress, yet specific inhibitors targeting its components remain scarce. Here, we targeted the UvrB protein, a central component of the Mtb UvrABC NER pathway, and identified novel small molecule inhibitors against its nucleotide binding domain (NBD). Using in silico structure-based screening involving the Maybridge library (~54,000 compounds), Molecular dynamics (MD) simulations, and Biolayer interferometry (BLI), we identified four potent inhibitors: SPB08143, RJC04069, NRB00936, and DP00786 with IC50 values of 9.
View Article and Find Full Text PDFJ Labelled Comp Radiopharm
July 2025
Department of Advanced Nuclear Medicine Sciences, Institute for Quantum Medical Science, National Institutes for Quantum Science and Technology (QST), Chiba, Japan.
(S,S)-2-(α-(2-[F]Fluoro[dideutero]methoxyphenoxy)benzyl)morpholine ([F]FMeNER-D), which is used to image the norepinephrine transporter in the brain via positron emission tomography (PET), is typically radiosynthesized by O-fluoromethylating norethylreboxetine (NER) with [F]bromofluoromethane-d using a fully automated F-labeling synthesizer with a two-pot unit. We simplified the automated radiosynthesis of [F]FMeNER-D through the use of a straightforward one-pot method to prepare [F]fluoromethyl-d-tosylate as the fluoromethylating agent (avoiding the need to azeotropically dry [F]F in advance), which was then reacted with NER. The reaction conditions were optimized, with [F]FMeNER-D synthesized using an F-labeling synthesizer equipped with a one-pot unit.
View Article and Find Full Text PDFSmall
August 2025
Centre for Nanotechnology, Indian Institute of Technology Guwahati, Guwahati, Assam, 781039, India.
The NiOx/perovskite buried interface critically influences the power conversion efficiency (PCE) and long-term stability of perovskite solar cells (PSCs) due to high defect density, suboptimal charge transport and associated interfacial redox reactions. Herein, this study introduces interfacial molecular layers of 1-(4-cyanophenyl) guanidine hydrochloride (CPGH) and 4-guanidinobenzoic acid hydrochloride (GBAH) onto NiOx. Theoretical calculations and experimental validation reveal the synergistic effect of functional groups in CPGH (─CN) and GBAH (─COOH) that interact with Ni ⁺ species and surface hydroxyls (─OH), effectively passivating redox-active sites and improving the Ni⁺/Ni⁺ ratio.
View Article and Find Full Text PDFMol Carcinog
August 2025
Laboratory of DNA Repair, Institute of Biomedical Sciences, University of São Paulo, São Paulo, SP, Brazil.
Ultraviolet A (UVA) radiation induces DNA damage both directly, by forming cyclobutane pyrimidine dimers (CPDs), and indirectly, by generating oxidative stress. Cells rely on nucleotide excision repair (NER) and translesion synthesis (TLS) to tolerate these lesions. Xeroderma pigmentosum variant (XP-V) cells, deficient in DNA polymerase eta (pol eta), exhibit a heightened risk of skin cancer due to impaired TLS.
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