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Integrating genomics and histology for cancer prognosis demonstrates promise. Here, we develop a multi-classifier system integrating a lncRNA-based classifier, a deep learning whole-slide-image-based classifier, and a clinicopathological classifier to accurately predict post-surgery localized (stage I-III) papillary renal cell carcinoma (pRCC) recurrence. The multi-classifier system demonstrates significantly higher predictive accuracy for recurrence-free survival (RFS) compared to the three single classifiers alone in the training set and in both validation sets (C-index 0.831-0.858 vs. 0.642-0.777, p < 0.05). The RFS in our multi-classifier-defined high-risk stage I/II and grade 1/2 groups is significantly worse than in the low-risk stage III and grade 3/4 groups (p < 0.05). Our multi-classifier system is a practical and reliable predictor for recurrence of localized pRCC after surgery that can be used with the current staging system to more accurately predict disease course and inform strategies for individualized adjuvant therapy.
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http://dx.doi.org/10.1038/s41467-024-50369-y | DOI Listing |
Sensors (Basel)
November 2024
School of Integrated Circuits, Shandong University, Jinan 250101, China.
Binarized convolutional neural networks (bCNNs) are favored for the design of low-storage, low-power cardiac arrhythmia classifiers owing to their high weight compression rate. However, multi-class classification of ECG signals based on bCNNs is challenging due to the accuracy loss introduced by the binarization operation. In this paper, an effective multi-classifier system is proposed for electrocardiogram (ECG) signals using a binarized depthwise separable convolutional neural network (bDSCNN) with the merged convolution-pooling (MCP) method.
View Article and Find Full Text PDFNat Commun
July 2024
Department of Urology, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, China.
Entropy (Basel)
January 2024
Science and Technology on Complex Electronic System Simulation Laboratory, Space Engineering University, Beijing 101400, China.
J Mol Biol
December 2023
Department of Electronics and Information Engineering, Jeonbuk National University, Jeonju 54896, South Korea; Advances Electronics and Information Research Center, Jeonbuk National University, Jeonju 54896, South Korea. Electronic address:
Enhancers are DNA regions that are responsible for controlling the expression of genes. Enhancers are usually found upstream or downstream of a gene, or even inside a gene's intron region, but are normally located at a distant location from the genes they control. By integrating experimental and computational approaches, it is possible to uncover enhancers within DNA sequences, which possess regulatory properties.
View Article and Find Full Text PDFBMC Bioinformatics
September 2023
Department of Statistics, Science and Research Branch, Islamic Azad University, Tehran, Iran.
Background And Objective: Diabetes is a life-threatening chronic disease with a growing global prevalence, necessitating early diagnosis and treatment to prevent severe complications. Machine learning has emerged as a promising approach for diabetes diagnosis, but challenges such as limited labeled data, frequent missing values, and dataset imbalance hinder the development of accurate prediction models. Therefore, a novel framework is required to address these challenges and improve performance.
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