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Inositol tris/tetrakis phosphate kinases (IPK) in the human fungal priority pathogens, (Arg1) and (Ipk2), convey numerous virulence functions, yet it is not known whether the IPK catalytic activity or a scaffolding role is responsible. We therefore generated a strain with a non-functional kinase, referred to as the dead-kinase (dk) Arg1 strain (dkArg1). We verified that, although dk cDNA cloned from this strain produced a protein with the expected molecular weight, dkArg1 was catalytically inactive with no IPK activity. Using recombinant Arg1 and Ipk2 we confirmed that, unlike the IPK homologs in humans and , Arg1 and Ipk2 do not phosphorylate the lipid-based substrate, phosphatidylinositol 4,5-bisphosphate, and therefore do not function as class I PI3Ks. Inositol polyphosphate profiling using capillary electrophoresis-electrospray ionization-mass spectrometry revealed that IP conversion is blocked in the dkArg1 and deletion (Δ) strains and that 1-IP and a recently discovered isomer (4/6-IP) are made by wild-type . Importantly, the dkArg1 and Δ strains had similar virulence defects, including suppressed growth at 37°C, melanization, capsule production, and phosphate starvation response, and were avirulent in an insect model, confirming that virulence is dependent on IPK catalytic activity. Our data also implicate the dkArg1 scaffold in transcriptional regulation of arginine metabolism but via a different mechanism to since Arg1 is dispensable for growth on different nitrogen sources. IPK catalytic activity therefore plays a dominant role in fungal virulence, and IPK pathway function has diverged in fungal pathogens.IMPORTANCEThe World Health Organization has emphasized the urgent need for global action in tackling the high morbidity and mortality rates stemming from invasive fungal infections, which are exacerbated by the limited variety and compromised effectiveness of available drug classes. Fungal IPK is a promising target for new therapy, as it is critical for promoting virulence of the human fungal priority pathogens, and , and impacts numerous functions, including cell wall integrity. This contrasts to current therapies, which only target a single function. IPK enzymes exert their effect through their inositol polyphosphate products or via the protein scaffold. Here, we confirm that the IPK catalytic activity of Arg1 promotes all virulence traits in that are attenuated by deletion reinforcing our ongoing efforts to find inositol polyphosphate effector proteins and to create inhibitors targeting the IPK catalytic site, as a new antifungal drug class.
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http://dx.doi.org/10.1128/mbio.00608-24 | DOI Listing |
Angew Chem Int Ed Engl
February 2025
State Key Laboratory of Natural Medicines, School of Traditional Chinese Pharmacy, China Pharmaceutical University, Nanjing, 211198, China.
Drimane-type merosesquiterpenoids (DMT) are a class of natural products with diverse structures and broad biological activity. Classical DMT synthesis relies on atom-inefficient plant-derived chiral pool building blocks, while alternative drimane-type building blocks such as drimenol and albicanol offer more direct routes but face production challenges. In this study, we engineered a microbial platform for efficient production of these building blocks.
View Article and Find Full Text PDFmBio
June 2024
Centre for Infectious Diseases and Microbiology, The Westmead Institute for Medical Research, Sydney, Australia.
Proteins
July 2024
Department of Chemistry and Biochemistry, University of Oklahoma, Norman, Oklahoma, USA.
Isopentenyl phosphate kinases (IPKs) have recently garnered attention for their central role in biocatalytic "isoprenol pathways," which seek to reduce the synthesis of the isoprenoid precursors to two enzymatic steps. Furthermore, the natural promiscuity of IPKs toward non-natural alkyl-monophosphates (alkyl-Ps) as substrates has hinted at the isoprenol pathways' potential to access novel isoprenoids with potentially useful activities. However, only a handful of IPK crystal structures have been solved to date, and even fewer of these contain non-natural substrates bound in the active site.
View Article and Find Full Text PDFAMB Express
October 2023
Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Corrensstr. 3, 06466, Seeland, OT Gatersleben, Germany.
Sphaerobacter thermophilus synthesizes an ω-transaminase (ω-TA) that allows the production of enantiomerically pure β-amino acids. To obtain ω-TA variants with a higher activity and more favorable properties for industrial use, we modified critical amino acid residues either in the catalytic center or in a previously proposed signature motif critical for aromatic β-amino acid ω-TAs. Seventeen different variants of this enzyme were generated and their activity was examined with four β-amino acids and one γ-amino acid, and compared with the wildtype's activity.
View Article and Find Full Text PDFACS Chem Biol
January 2022
Department of Chemistry and Biochemistry, University of Oklahoma, Stephenson Life Sciences Research Center, 101 Stephenson Pkwy, Norman, Oklahoma 73019, United States.
Isopentenyl phosphate kinases (IPKs) catalyze the ATP-dependent phosphorylation of isopentenyl monophosphate (IP) to isopentenyl diphosphate (IPP) in the alternate mevalonate pathways of the archaea and plant cytoplasm. In recent years, IPKs have also been employed in artificial biosynthetic pathways called "(iso) prenol pathways" that utilize promiscuous kinases to sequentially phosphorylate (iso) prenol and generate the isoprenoid precursors IPP and dimethylallyl diphosphate (DMAPP). Furthermore, IPKs have garnered attention for their impressive substrate promiscuity toward non-natural alkyl-monophosphates (alkyl-Ps), which has prompted their utilization as biocatalysts for the generation of novel isoprenoids.
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