A PHP Error was encountered

Severity: Warning

Message: file_get_contents(https://...@gmail.com&api_key=61f08fa0b96a73de8c900d749fcb997acc09&a=1): Failed to open stream: Network is unreachable

Filename: helpers/my_audit_helper.php

Line Number: 197

Backtrace:

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 197
Function: file_get_contents

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 271
Function: simplexml_load_file_from_url

File: /var/www/html/application/helpers/my_audit_helper.php
Line: 3165
Function: getPubMedXML

File: /var/www/html/application/controllers/Detail.php
Line: 597
Function: pubMedSearch_Global

File: /var/www/html/application/controllers/Detail.php
Line: 511
Function: pubMedGetRelatedKeyword

File: /var/www/html/index.php
Line: 317
Function: require_once

The Comparative Genomics of Botryosphaeriaceae Suggests Gene Families of Related to Pathogenicity on Chinese Hickory Tree. | LitMetric

Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

Trunk canker poses a major threat to the production of Chinese hickory tree ( Sarg.), which is primarily determined by Botryosphaeriaceae. In our previous work, we identified as the predominant pathogen of this disease. However, it is still unclear about corresponding gene families and mechanisms associated with 's pathogenicity on Chinese hickory tree. Here, we present a comparative analysis of high-quality genome assemblies of and other isolated pathogens, showing highly syntenic relationships between and its closely related species and the conservative evolution of the Botryosphaeriaceae family. Higher GC contents were found in the genomes of and three other isolated pathogens (, and ) compared to , , and . An investigation of genes specific to or expanded in revealed that one secreted glucanase, one orsellinic acid biosynthesis enzyme, and two MFS transporters positively regulated 's pathogenicity. We also observed an overrepresentation of viral integrase like gene and heterokaryon incompatibility proteins in the 's genome. In addition, we observed one LRR-domain-containing protein and two Sec-domain-containing proteins (Sec_1 and Sec_7) that underwent positive selection. This study will help to understand 's pathogenicity and potential influence on the infection of Chinese hickory, which will help in the development of disease control and ensure the security of Chinese hickory production.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC11051394PMC
http://dx.doi.org/10.3390/jof10040299DOI Listing

Publication Analysis

Top Keywords

chinese hickory
20
hickory tree
12
gene families
8
pathogenicity chinese
8
isolated pathogens
8
will help
8
chinese
5
hickory
5
comparative genomics
4
genomics botryosphaeriaceae
4

Similar Publications