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A novel mesophilic, hydrogen- and thiosulfate-oxidizing bacterium, strain ISO32, was isolated from diffuse-flow hydrothermal fluids from the Crab Spa vent on the East Pacific Rise. Cells of ISO32 were rods, being motile by means of a single polar flagellum. The isolate grew at a temperature range between 30 and 55 °C (optimum, 43 °C), at a pH range between 5.3 and 7.6 (optimum, pH 5.8) and in the presence of 2.0-4.0 % NaCl (optimum, 2.5 %). The isolate was able to grow chemolithoautotrophically with molecular hydrogen, thiosulfate or elemental sulfur as the sole electron donor. Thiosulfate, elemental sulfur, nitrate and molecular oxygen were each used as a sole electron acceptor. Phylogenetic analysis of 16S rRNA gene sequences placed ISO32 in the genus of the class , with EP1-55-1 % as its closest relative (95.95 % similarity). On the basis of the phylogenetic, physiological and genomic characteristics, it is proposed that the organism represents a novel species within the genus , sp. nov. The type strain is ISO32 (=JCM 39185 =KCTC 25252). Furthermore, the genomic properties of members of the genus are distinguished from those of members of other thermophilic genera in the orders ( and ) and (, and ), with larger genome sizes and lower 16S rRNA G+C content values. Comprehensive metabolic comparisons based on genomes revealed that genes responsible for the Pta-AckA pathway were observed exclusively in members of mesophilic genera in the order and of the genus . Our results indicate that the genus contributes to elucidating the evolutionary history of in terms of metabolism and transition from a thermophilic to a mesophilic lifestyle.
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http://dx.doi.org/10.1099/ijsem.0.006132 | DOI Listing |
Int J Syst Evol Microbiol
November 2023
Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, Hakodate, Japan.
A novel mesophilic, hydrogen- and thiosulfate-oxidizing bacterium, strain ISO32, was isolated from diffuse-flow hydrothermal fluids from the Crab Spa vent on the East Pacific Rise. Cells of ISO32 were rods, being motile by means of a single polar flagellum. The isolate grew at a temperature range between 30 and 55 °C (optimum, 43 °C), at a pH range between 5.
View Article and Find Full Text PDFFolia Microbiol (Praha)
April 2024
Department of Agricultural Microbiology, Directorate of Natural Resource Management, Agricultural College and Research Institute, Coimbatore, 641003, India.
Sulfur-oxidizing bacteria (SOB) are versatile microorganisms known for their ability to oxidize various reduced sulfur compounds, namely, elemental sulfur (S), hydrogen sulfide (HS), tetrathionate (SO), and trithionate (SO) to sulfate (SO). In this study, out of twelve SOB isolates from rice rhizosphere, five were screened based on their sulfur oxidation potential, viz., SOB1, SOB2, SOB3, SOB4, and SOB5, and were identified as Ochrobactrum soli SOB1, Achromobacter xylosoxidans SOB2, Stenotrophomonas maltophilia SOB3, Brucella tritici SOB4, and Stenotrophomonas pavanii SOB5, respectively.
View Article and Find Full Text PDFArch Microbiol
December 2022
Laboratory of Microbiology, Faculty of Fisheries Sciences, Hokkaido University, 3-1-1, Minato-Cho, Hakodate, 041-8611, Japan.
A novel bacterium, strain MOT50, was isolated from the chimney structure at the Iheya North field in the Mid-Okinawa Trough. The cells were motile short rods with a single polar flagellum. Growth was observed between 40 and 65 ℃ (optimum, 52 ℃), at pH values between 5.
View Article and Find Full Text PDFSci Total Environ
August 2019
Aquatic Geomicrobiology, Institute of Biodiversity, Friedrich Schiller University Jena, Dornburger Straße 159, 07743 Jena, Germany; German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Deutscher Platz 5E, 04103 Leipzig, Germany. Electronic address:
Terrestrial subsurface microbial communities are not restricted to the fluid-filled void system commonly targeted during groundwater sampling but are able to inhabit and dwell in rocks. However, compared to the exploration of the deep biosphere, endolithic niches in shallow sedimentary bedrock have received little interest so far. Despite the potential contribution of rock matrix dwellers to matter cycling and groundwater resource quality, their identity and diversity patterns are largely unknown.
View Article and Find Full Text PDFBiosci Biotechnol Biochem
October 2016
a Division of Agricultural and Life Science, Graduate School of Environmental and Life Science , Okayama University, Okayama , Japan.
A marine acidophilic sulfur-oxidizing bacterium, Acidithiobacillus thiooxidans strain SH, was isolated to develop a bioleaching process for NaCl-containing sulfide minerals. Because the sulfur moiety of sulfide minerals is metabolized to sulfate via thiosulfate as an intermediate, we purified and characterized the thiosulfate dehydrogenase (TSD) from strain SH. The enzyme had an apparent molecular mass of 44 kDa and was purified 71-fold from the solubilized membrane fraction.
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