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The transcription factor LEAFY (LFY) plays crucial roles in flower development by activating floral homeotic genes. Activation of LFY targets requires the combined action of LFY and the E3 ubiquitin ligase UFO, although the precise underlying mechanism remains unclear. Here, we show that LFY accumulates in biomolecular condensates within the cytoplasm, while recombinant LFY forms condensates with similar properties . UFO interacts with LFY within these condensates and marks it for degradation. LFY levels in the nucleus are buffered against changes in total LFY levels induced by proteasome inhibition, UFO overexpression, or mutation of lysine residues in a disordered region of LFY. Perturbation of cytoplasmic LFY condensates by 1,6-hexanediol treatment induces the relocalization of LFY to the nucleus and the subsequent activation of the LFY target in flowers. Our data suggest that nucleocytoplasmic partitioning, condensation, and ubiquitin-dependent degradation regulate LFY levels in the nucleus to control its activity.
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http://dx.doi.org/10.1016/j.isci.2023.106880 | DOI Listing |
BMC Plant Biol
August 2025
Department of Plant Taxonomy and Nature Conservation, Faculty of Biology, The University of Gdańsk, Wita Stwosza 59, 80-308, Gdansk, Poland.
Background: The taxonomy of Paphiopedilum-a diverse group of slipper orchids-has long posed challenges due to high morphological variability and conflicting phylogenetic signals. Despite intensive research, a clear and stable infrageneric classification remains unresolved.
Results: We present an integrative phylogenetic framework based on multiple nuclear low-copy genes (XDH, PHYC, LFY, RAD51, ACO, DEF4), ITS and plastid (matK) sequences, supported by morphological and biogeographical data.
Int J Biol Macromol
September 2025
Division of Biliary Surgery, Department of General Surgery, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China; Research Center for Biliary Diseases, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China. Electronic address:
Gut microbiota has been implicated in various diseases, exerting systemic effects on the host by activating or inhibiting gene expression. However, the precise role of gut microbiota and its downstream targets in hepatocellular carcinoma (HCC) progression remains poorly understood. To address this gap, we developed a computational method, termed the microbial-associated signature (MAS) score, to characterize gut microbiota-induced transcriptional alterations across 33 cancer types and 29 normal tissues.
View Article and Find Full Text PDFPlants (Basel)
July 2025
Key Laboratory of Cultivation and Utilization for Oil-Camellia Resources, Experimental Center for Subtropical Forestry, Chinese Academy of Forestry, Xinyu 336600, China.
Flowering is a key agronomic trait that directly influences the yield of the tea-oil tree (). Floral initiation, which precedes flower bud differentiation, represents a critical developmental stage affecting the flowering outcomes. However, the molecular mechanisms underlying floral initiation in remain poorly understood.
View Article and Find Full Text PDFWorld J Gastrointest Oncol
July 2025
Division of Biliary Tract Surgery, Department of General Surgery, West China Hospital, Sichuan University, Chengdu 610041, Sichuan Province, China.
Background: Cholangiocarcinoma (CCA) comprises heterogeneous malignancies arising at different anatomical locations: Intrahepatic cholangiocarcinoma (IHCC), perihilar cholangiocarcinoma (PHCC), and distal cholangiocarcinoma (DCC). These subtypes exhibit distinct clinical behaviors, treatment approaches, and outcomes. Despite advances in surgical and adjuvant therapies, the prognostic implications of tumor location remain unclear and inconsistently reported.
View Article and Find Full Text PDFSci Rep
July 2025
Division of Biliary Tract Surgery, Department of General Surgery, West China Hospital, Sichuan University, Chengdu, Sichuan Province, China.
Hepatitis B virus (HBV) infection is a major driver of hepatocellular carcinoma (HCC), yet the mechanisms by which HBV triggers HCC and how it interacts with the immune system remain largely undefined. In this study, 53 immune-related key genes involved in HBV-associated HCC progression were identified. By analyzing the mean C-index of 101 machine learning models, the optimal model-combining stepwise Cox regression (forward) with RSF-was developed to characterize the immune risk index.
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