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Genome sequencing and annotation of , a fungal pathogen causing leaf spot to . | LitMetric

Genome sequencing and annotation of , a fungal pathogen causing leaf spot to .

3 Biotech

Department of Mycology and Plant Pathology, Institute of Agricultural Sciences, Banaras Hindu University, Varanasi, Uttar Pradesh 221005 India.

Published: February 2023


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Article Abstract

Unlabelled: is a plant pathogen that causes leaf spot disease in sesame plants worldwide. In this study, genome sequence assembly of isolate Cers 52-10 (MCC 9069) was generated using native paired-end and mate-pair DNA sequencing based on the Illumina HiSeq 2500 platform The genome assembly of is 34.3 Mb in size with an N50 of 26,222 bp and an average GC content of 53.02%. A total number of 10,872 genes were predicted in this study, out of which 9,712 genes were functionally annotated. Genes assigned to carbohydrate-active enzyme classes were also identified during the study. A total of 80 putative effector candidates were predicted and functionally annotated. The genome sequence is available at DDBJ/ENA/GenBank, and other associated information is submitted to Mendeley's data.

Supplementary Information: The online version contains supplementary material available at 10.1007/s13205-023-03468-4.

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Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC9852405PMC
http://dx.doi.org/10.1007/s13205-023-03468-4DOI Listing

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