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Alginic acid, a naturally occurring anionic polyelectrolyte, forms strong physically cross-linked hydrogels in the presence of metal cations. The latter engage in electrostatic interactions that compete with intra- and intermolecular hydrogen bonds, determining the gel structure and properties of the system in aqueous media. In this study, we use all-atom molecular dynamics simulations to systematically analyze the interactions between alginic acid chains and Na and Ca counterions. The formed alginates originate from the competition of intramolecular hydrogen bonding and water coordination around the polyelectrolyte. In contrast to the established interpretation, we show that calcium cations strongly bind to alginate by disrupting hydrogen bonds within (1 → 4)-linked β-d-mannuronate (M) residues. On the other hand, Na cations enhance intramolecular hydrogen bonds that stabilize a left-hand, fourfold helical chain structure in poly-M alginate, resulting in stiffer chains. Hence, the traditionally accepted flexible flat-chain model for poly-M sequence is not valid in the presence of Na. The two cations have a distinct effect on water coordination around alginate and therefore on its solubility. While Ca disrupts water coordination directly around the alginate chains, mobile Na cations significantly disrupt the second hydration layer.
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http://dx.doi.org/10.1021/acs.biomac.1c01591 | DOI Listing |
Nucleic Acids Res
September 2025
Department of Biological Sciences, Columbia University, New York, NY 10027, United States.
The 3'-end cleavage and polyadenylation of pre-mRNAs is dependent on a key hexanucleotide motif known as the polyadenylation signal (PAS). The PAS hexamer is recognized by the mammalian polyadenylation specificity factor (mPSF). AAUAAA is the most frequent PAS hexamer and together with AUUAAA, the second most frequent hexamer, account for ∼75% of the poly(A) signals.
View Article and Find Full Text PDFInt J Biol Macromol
September 2025
Key Laboratory of Oil & Gas Fine Chemicals, School of Chemical Engineering, Xinjiang University, Urumqi, 830046, China.
With the acceleration of global industrialization, a large amount of polluted wastewater is discharged indiscriminately, which both pollutes the environment and threatens human health. In this study, by constructing a binary system of unsaturated polyester resin/carboxychitosan, and improving the inherent defects of carboxychitosan aerogel, we successfully prepared aerogels with high porosity, low density, and laminar porous structure for water remediation by using a combination of the sol-gel method and directional freezing technology. Thanks to the synergistic effect of surface wettability and special pore structure, the aerogel not only adsorbs and separates MB and Pb(II) efficiently with a separation efficiency of more than 99 %, but also has a separation efficiency of 99.
View Article and Find Full Text PDFJ Adv Res
September 2025
(1)School of Biological Engineering, Zhuhai Campus of Zunyi Medical University, Guangdong 519000, China. Electronic address:
Introduction: Traditional hydrogels with poor mechanical properties and lack of biological activities severely limit their application in wound therapy. Designing multifunctional hydrogels for monitoring and accelerating wound healing remains imperative.
Objectives: The aim of this study is to develop a multifunctional antifreeze ionic conductive Gel-TBA@organohydrogel with antibacterial, anti-inflammatory and antioxidant properties for monitoring and wound treatment.
J Ethnopharmacol
September 2025
State Key Laboratory of Phytochemistry and Natural Medicines, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China; Jiangxi Provincial Key Laboratory for Pharmacodynamic Material Basis of Traditional Chinese Medicine, Ganjiang Chinese Medicine Innovation Center, Na
Ethnopharmacological Relevance: The traditional Chinese medicine Psoralea corylifolia L. (PCL) has been clinically used to treat diarrhea and gastrointestinal inflammatory disorders. G protein-coupled receptor 84 (GPR84) is emerging as a potential target for inflammatory bowel disease (IBD).
View Article and Find Full Text PDFEnviron Res
September 2025
College of Chemistry, Chemical Engineering and Environment, Minnan Normal University, Zhangzhou 363000, China; Fujian Province Key Laboratory of Morden Analytical Science and Separation Technology, Minnan Normal University, Zhangzhou 363000, China; Fujian Provincial University Key Laboratory of Poll
The derivation of defect-engineered metal-organic frameworks (MOFs) from industrial waste simultaneously mitigates environmental pollution, reduces MOF synthesis costs, and enhances adsorption performance. Herein, this study demonstrates a sustainable strategy for the resourceful synthesis of iron-based MOF s-MIL-100(Fe) using galvanizing pickling waste liquor (80.5 wt.
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