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Feature-based molecular networking was used to re-examine the secondary metabolites in extracts of a very well studied marine sponge, , known to contain a large array of cyclic peptides and brominated alkaloids. The analysis revealed the presence of 13 cyclic peptides in the sponge that had never been detected in previous work and appeared to be new compounds. The most abundant one was isolated and shown to be a new proline-rich cyclic heptapetide that was called stylissamide L (). Structure of compound , including the cis/trans geometry of the three proline residues, was determined by extensive NMR studies; the l configuration of the seven amino acid residues was determined using Marfey's method. Stylissamide L was tested for activity as a cell growth inhibitor and cell migration inhibitor on two cancer cell lines but, unlike other members of the stylissamide family, it showed no significant activity. This approach showed that even a thoroughly studied species such as may contain new chemistry that can be revealed if studied with the right tools.
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http://dx.doi.org/10.3390/md18090443 | DOI Listing |
Phytochemistry
September 2025
Équipe "Chimie des substances naturelles" BioCIS, CNRS, Université Paris-Saclay, 17, avenue des Sciences, 91400, Orsay, France. Electronic address:
Throughout the past decades, annonaceous plants have been of particular interest to the natural product community because of their therapeutic value and their richness in isoquinoline alkaloids. Taking advantage from our laboratory historical collection of these compounds, a MS/MS database of 322 isoquinolines and other metabolites from Annonaceae was implemented and named IQAMDB . The present report describes the dereplication of known alkaloids from stem barks of Greenwayodendron suaveolens (Engl.
View Article and Find Full Text PDFFood Chem
August 2025
SPO, Univ Montpellier, INRAE, Institut Agro, Montpellier, France; INRAE, CALIS Research Infrastructure, PROBE Research Infrastructure, PFP Polyphenol analysis facility, Montpellier, France. Electronic address:
Ion mobility spectrometry (IMS) may improve feature-based molecular networking (FBMN) for annotating polyphenol isomers co-eluted in chromatography. The study aimed to assess the added value of trapped ion mobility spectrometry (TIMS) in metabolomics with FBMN for cocoa polyphenols. Untargeted analyses were performed on black and brown cocoa beans using a UHPLC-TIMS-Q-TOF system, with or without TIMS.
View Article and Find Full Text PDFCell Rep
September 2025
State Key Laboratory of Pathogen and Biosecurity, Academy of Military Medical Sciences, Beijing 100071, China. Electronic address:
De novo design of antimicrobial peptides (AMPs) is challenging due to the vast combinatorial space and unknown mechanisms. We propose EBAMP, a generative-discriminative framework for de novo broad-spectrum AMP design targeting bacteria and fungi. EBAMP combines a Transformer-based generative model with advanced feature-based screening to explore peptide space and select multiobjective candidates.
View Article and Find Full Text PDFEnviron Microbiol Rep
October 2025
Department of Earth and Environmental Sciences, University of Michigan, Ann Arbor, Michigan, USA.
Microcystis aeruginosa is a toxic cyanobacteria species that is often abundant during cyanobacterial harmful algal blooms (cyanoHABs) in freshwaters. This study examined how growth on different nitrogen substrates influences the exometabolome of toxic and non-toxic strains of M. aeruginosa.
View Article and Find Full Text PDFTalanta
August 2025
National Institutes for Food and Drug Control, Beijing, 102629, P.R. China; State Key Laboratory of Drug Regulatory Science, Beijing, 102629, P.R. China. Electronic address:
As concealment methods for illegal cosmetic adulteration advance, identifying non-library or unexpected additives remains challenging. This study presents a novel integrated strategy for rapid, non-targeted detection of reference-standard-free illegal cosmetic additives, especially emerging structural analogs of known prohibited compounds. The quinolone case study validated the strategy's broad applicability to cosmetics.
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