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Soil samples must usually be stored for a time between collection and measurements of microbial metabolic properties. However, little is known about the influence of storage conditions on microbial metabolism when studied by calorespirometry. Calorespirometry measures the heat rate and the CO rate of microbial metabolism, where the ratio of heat and CO released, the calorespirometric ratio, informs about the nature of substrates being used by microorganisms. Application to soil microbiology is very recent, and little is known about the influence of the common soil preparation practices between collection and analysis on the calorespirometric measurements. For these reasons, the effect of storage at 4 °C on the microbial metabolism was determined by calorespirometry. Results show CO production rate decreases with storage time while the evolution of metabolic heat rate is more stable. The calorespirometric ratio increases with storage time in soil samples with organic matter characterized by lower carbohydrate contribution to the total carbon and higher aromaticity and is unaffected in soil samples with lower carbohydrates in the organic matter and higher aromaticity. Therefore, the calorespirometric ratio values may vary for the same soil sample, such that the soil organic matter properties, as well as the time stored at 4 °C, must be considered in interpreting calorespirometric data on soils.
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http://dx.doi.org/10.3934/microbiol.2017.4.762 | DOI Listing |
Environ Microbiol Rep
October 2025
Department of Soil Science and Plant Nutrition, Faculty of Agriculture, Selcuk University, Konya, Türkiye.
Boron toxicity and salinity are major abiotic stress factors that cause significant yield losses, particularly in arid and semi-arid regions. Hyperaccumulator plants, such as Puccinella distans (Jacq.) Parl.
View Article and Find Full Text PDFNPJ Biofilms Microbiomes
September 2025
Imperial College Parturition Research Group, Institute of Reproductive and Developmental Biology, Department of Metabolism, Digestion and Reproduction, Imperial College London, London, UK.
The mechanisms by which vaginal microbiota shape spontaneous preterm birth (sPTB) risk remain poorly defined. Using electronic clinical records data from 74,913 maternities in conjunction with metaxanomic (n = 596) and immune profiling (n = 314) data, we show that the B blood group phenotype associates with increased risk of sPTB and adverse vaginal microbiota composition. The O blood group associates with sPTB in women who have a combination of a previous history of sPTB, an adverse vaginal microbial composition and pro-inflammatory cervicovaginal milieu.
View Article and Find Full Text PDFNat Commun
September 2025
Research Institute for Microbial Diseases, Osaka University, Suita, Osaka, Japan.
Radial spokes (RSs) are conserved multimolecular structures attached to the axonemal microtubule doublets and are essential for the motility control of both cilia and sperm flagella. CFAP91, an RS3 protein, is implicated in human male infertility, yet its molecular function remains poorly understood. Here, we demonstrate that Cfap91 knockout (KO) mice exhibit impaired sperm flagellum formation and male infertility.
View Article and Find Full Text PDFPhysiol Rep
September 2025
Center for Physical Activity Research, National Institutes of Biomedical Innovation, Health and Nutrition, Settsu, Japan.
This study investigated the association between parameters derived from bioelectrical impedance spectroscopy (BIS) and arterial stiffness, as measured using carotid-femoral pulse wave velocity (cfPWV) and brachial-ankle pulse wave velocity (baPWV) pulse wave velocities. Data from 292 Japanese adults were analyzed. BIS was used to assess the phase angle (PhA), extracellular water to intracellular water ratio (ECW/ICW), and body cell mass-to-free fat mass ratio (BCM/FFM).
View Article and Find Full Text PDFChem Pharm Bull (Tokyo)
September 2025
Division of Natural Product Chemistry, Faculty of Pharmaceutical Sciences, Tohoku Medical and Pharmaceutical University, 4-4-1 Komatsushima, Aoba-ku, Sendai 981-8558, Japan.
In screening for antibacterial agents from co-cultures of Mycobacterium smegmatis and microbial resources, such as actinomycetes and fungi, the known hydroxyquinone antibiotic griseorhodin A (1) was isolated from a co-culture of actinomycete strain TMPU-20A002 and M. smegmatis. Compound 1 exhibited antibacterial activity against methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococcus faecalis (VRE), with minimum inhibitory concentrations of 0.
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