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The circadian oscillator relies on a negative transcriptional feedback loop, in which the PERIOD (PER) and TIMELESS (TIM) proteins repress the expression of their own gene by inhibiting the activity of the CLOCK (CLK) and CYCLE (CYC) transcription factors. A series of posttranslational modifications contribute to the oscillations of the PER and TIM proteins but few posttranscriptional mechanisms have been described that affect mRNA stability. Here we report that down-regulation of the POP2 deadenylase, a key component of the CCR4-NOT deadenylation complex, alters behavioral rhythms. Down-regulating POP2 specifically increases TIM protein and mRNA but not pre-mRNA, supporting a posttranscriptional role. Indeed, reduced POP2 levels induce a lengthening of mRNA poly(A) tail. Surprisingly, such effects are lost in mutants, supporting a PER-dependent inhibition of mRNA deadenylation by POP2. We report a deadenylation mechanism that controls the oscillations of a core clock gene transcript.
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http://dx.doi.org/10.1073/pnas.1814418116 | DOI Listing |
Blood Adv
September 2025
BC Cancer, Vancouver, British Columbia, Canada.
Classical Hodgkin Lymphoma (CHL) is characterized by a complex tumor microenvironment (TME) that supports disease progression. While immune cell recruitment by Hodgkin and Reed-Sternberg (HRS) cells is well-documented, the role of non-malignant B cells in relapse remains unclear. Using single-cell RNA sequencing (scRNA-seq) on paired diagnostic and relapsed CHL samples, we identified distinct shifts in B-cell populations, particularly an enrichment of naïve B cells and a reduction of memory B cells in early-relapse compared to late-relapse and newly diagnosed CHL.
View Article and Find Full Text PDFBioimpacts
August 2025
Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan 420008, Russia.
Introduction: Multiple sclerosis (MS) is a chronic autoimmune disease of the central nervous system (CNS). CD4 CD25 Tregs, which normally suppress immune responses, exhibit impaired function in MS. Treg-derived extracellular vesicles (EVs) carry immunoregulatory proteins and miRNAs that modulate T-cell activity.
View Article and Find Full Text PDFOncol Lett
November 2025
Service of Immunology, University Hospital 'José Eleuterio González', Autonomous University of Nuevo León, Monterrey, Nuevo León 64460, Mexico.
Clear cell renal cell carcinoma (ccRCC) is a neoplastic disease associated with poor prognosis. Localized disease is successfully treated with nephrectomy; however, advanced disease often requires the combined use of immunotherapy and targeted therapy. To the best of our knowledge, there is no validated method to predict immunotherapy response and there is a lack of knowledge regarding the expression kinetics of exhaustion receptors in the early stages of ccRCC.
View Article and Find Full Text PDFFront Immunol
September 2025
Department of Hematology, Tianjin Medical University General Hospital, Tianjin, China.
Myelodysplastic syndromes (MDS) are heterogeneous myeloid clonal disorders derived from hematopoietic stem cells. The incidence of MDS (1.51/100,000 in China, 4-5/100,000 in Europe and America) is higher than any subtype of leukemia.
View Article and Find Full Text PDFACS Cent Sci
August 2025
California Institute for Quantitative Biosciences, University of California Berkeley, Berkeley, California 94720, United States.
Orotidine 5'-monophosphate decarboxylase (OMPDC) is among the most efficient enzymes known, accelerating the decarboxylation of the OMP by ∼17 orders of magnitude, primarily by lowering the enthalpy of activation by ∼28 kcal/mol. Despite this feature, OMPDC from requires ∼15 kcal/mol of activation energy following ES complex formation. This study applies temperature-dependent hydrogen-deuterium exchange mass spectrometry (TDHDX) to detect site-specific thermal protein networks that channel energy from solvent collisions to the active site.
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