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The use of non-equilibrium molecular dynamics facilitates the calculation of the cation diffusion constant of Li2O at temperatures too low to be accessible by other methods. Excellent agreement with experimental diffusion coefficients has been obtained over the temperature range 873 < T/K < 1603. Diffusion below 1200 K was shown to be dominated by a concerted nearest-neighbour hopping process, whereas in the high-temperature superionic region an additional mechanism involving a six-coordinate interstitial cation site in the anti-fluorite structure becomes increasingly dominant. Our model thus accounts for the transition from the superionic regime to the non-superionic regime.
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http://dx.doi.org/10.1039/c5cp02628h | DOI Listing |
J Phys Chem A
September 2025
MOE Key Laboratory for Non-Equilibrium Synthesis and Modulation of Condensed Matter, School of Physics, Xi'an Jiaotong University, Xi'an 710049, Shaanxi, P. R. China.
Understanding the active sites of copper (Cu)-based catalysts toward CO is a prerequisite for improving their rational design. The reactivity of copper oxide cluster anions CuO ( = 3-9) and bare copper cluster anions Cu toward CO has been investigated at room temperature by employing mass spectrometry combined with density functional theory (DFT) calculations. Only adsorption products are observed for the reaction of CuO with CO.
View Article and Find Full Text PDFJ Chem Phys
September 2025
Department of Biosciences, Università degli Studi di Milano, Via Celoria 26, 20133 Milan, Italy.
This study introduces a novel computational approach based on ratchet-and-pawl molecular dynamics (rMD) for accurately estimating ligand dissociation kinetics in protein-ligand complexes. By integrating Kramers's theory with Bell's equation, our method systematically investigates the relationship between the effective biasing force applied during simulations and the ligand residence times. The proposed technique is demonstrated through extensive simulations of the benzamidine-trypsin complex, employing first an implicit solvent model (multi-eGO) to set up the approach parameters and then an explicit solvent model.
View Article and Find Full Text PDFPhys Chem Chem Phys
September 2025
Department of Physics, Indian Institute of Technology Jodhpur, N.H. 62, Nagaur Road, Karwar, Jodhpur, Rajasthan, 342030, India.
We report an anomalous temperature-induced transition in thermal conductivity in the germanene monolayer around a critical temperature = 350 K. Equilibrium molecular dynamics simulations reveal a transition from ∼ scaling below the to ∼ above, contrasting with conventional ∼ behavior. This anomalous scaling correlates with the long-scale characteristic timescale obtained from double exponential fitting of the heat current autocorrelation function.
View Article and Find Full Text PDFJ Chromatogr A
October 2025
Waters Corporation, Instrument/Core Research/Fundamental, Milford, MA, 01757, USA. Electronic address:
Since the emergence of liquid chromatography in the 1960s, the resolution performance of randomly packed columns has improved significantly. This progress is primarily due to the reduction in particle size and the continuous development of proprietary packing procedures for these fine particles. Despite these advancements, the performance of pressure-driven analytical columns has reached a plateau and remains significantly lower than the ultimate performance observed in electro-driven chromatography, where dispersion is limited solely by molecular diffusion.
View Article and Find Full Text PDFNat Commun
August 2025
Maxwell Centre, Cavendish Laboratory, Department of Physics, University of Cambridge, J J Thomson Avenue, Cambridge, CB3 0HE, UK.
Biomolecular condensates play wide-ranging roles in cellular compartmentalization and biological processes. However, their transition from a functional liquid-like phase into a solid-like state-usually termed as condensate ageing-represents a hallmark associated with the onset of multiple neurodegenerative diseases. In this study, we design a computational pipeline to explore potential candidates, in the form of small peptides, to regulate ageing kinetics in biomolecular condensates.
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