98%
921
2 minutes
20
Atomic Force Microscopy (AFM) can be used to obtain high-resolution topographical images of bacteria revealing surface details and cell integrity. During scanning however, the interactions between the AFM probe and the membrane results in distortion of the images. Such distortions or artifacts are the result of geometrical effects related to bacterial cell height, specimen curvature and the AFM probe geometry. The most common artifact in imaging is surface broadening, what can lead to errors in bacterial sizing. Several methods of correction have been proposed to compensate for these artifacts and in this study we describe a simple geometric model for the interaction between the tip (a pyramidal shaped AFM probe) and the bacterium (Escherichia coli JM-109 strain) to minimize the enlarging effect. Approaches to bacteria immobilization and examples of AFM images analysis are also described.
Download full-text PDF |
Source |
---|---|
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3768968 | PMC |
http://dx.doi.org/10.1590/S1517-838220120001000040 | DOI Listing |
Biophys Chem
September 2025
Department of Biophysics, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran.
A comprehensive understanding of the molecular mechanism underlying the Liquid-Liquid Phase Separation (LLPS) pathway of LCD-TDP43 remains a challenge in the context of its neuropathogenesis. The primary driving force behind the TDP-43 LLPS is the interplay of hydrophobic interactions reinforced by aromatic residues. This study presents a novel, convenient, sensitive, and probe-free approach using excitation-emission matrix (EEM) fluorescence to monitor the microenvironment of aromatic residues and π-π stacking interactions during different stages of the LLPS pathway.
View Article and Find Full Text PDFAngew Chem Int Ed Engl
September 2025
Key Laboratory of Molecular Nanostructure and Nanotechnology, Beijing National Laboratory for Molecular Sciences, CAS Research/Education Center for Excellence in Molecular Sciences, Institute of Chemistry, Chinese Academy of Sciences, Beijing, 100190, P.R. China.
Alloy anodes with high specific capacity are extensively utilized in all-solid-state batteries (ASSBs). However, they are challenged by interfacial kinetic and mechanical issues. Real-time investigation of interfacial failure mechanisms at the nanoscale is crucial for optimizing the alloy anodes.
View Article and Find Full Text PDFAdv Funct Mater
January 2025
Department of Bioengineering, University of California, Los Angeles, CA 90095, USA.
Cell reprogramming and manufacturing have broad applications in tissue regeneration and disease treatment. However, many derived cell types lack unique cell surface markers for protein-based cell sorting, making it difficult to isolate these cells from mixed populations. Additionally, there is a need to identify and isolate cells of interest at the early stages of cell expansion.
View Article and Find Full Text PDFMicromachines (Basel)
August 2025
Instute of Semiconductor Technology, Technische Universität Braunschweig, 38106 Braunschweig, Germany.
In this study we report on the structural, mechanical, and electrical characterization of different structures of vertically aligned zinc oxide (ZnO) nanowires (NWs) synthesized using hydrothermal methods. By optimizing the growth conditions, scanning electron microscopy (SEM) micrographs show that the ZnO NWs could reach an astounding 51.9 ± 0.
View Article and Find Full Text PDFChem Biomed Imaging
August 2025
Institute of Chemistry, The Hebrew University, Jerusalem 9190401, Israel.
The acid-base properties of catalytic materials play a crucial role in facilitating chemical transformations. Nanoscale structural heterogeneities within these catalysts can significantly affect the distribution, type, and strength of their acid-base sites, thereby influencing both localized and overall catalytic reactivity. In this study, high spatial-resolution chemical imaging of basic sites on supported Mg-Al mixed oxide (MgAlO) particles, which serve as catalysts for aldol condensation reactions, was achieved using atomic force microscopy-infrared (AFM-IR) nanospectroscopy measurements while using formic acid as a chemical probe for surface basic sites detection.
View Article and Find Full Text PDF